RNA–Protein interactions for RNA: ENST00000426778.5

ERCC3-202, Transcript of ERCC excision repair 3, TFIIH core complex helicase subunit, humanhuman

TSL 2

Gene ERCC3, Length 2,916 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3-202ENST00000426778 UCP3P55916 312 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 RNF212Q495C1 297 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 C4orf17Q53FE4 359 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 GFI1BQ5VTD9 330 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 ABLIM2Q6H8Q1 611 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 FAM53AQ6NSI3 398 aaPredicted RBP12.28□□□□□ -0.44
ERCC3-202ENST00000426778 ZNF429Q86V71 674 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 C12orf49Q9H741 205 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 PPP1R3CQ9UQK1 317 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 HMGB3O15347 200 aaKnown RBP12.28□□□□□ -0.44
ERCC3-202ENST00000426778 CDS2O95674 445 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 PAX9P55771 341 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 ICAM4Q14773 271 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 AKR1C8PQ5T2L2 129 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 CMTM1Q8IZ96 169 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 SGCZQ96LD1 299 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 TAAR9Q96RI9 348 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 C1QTNF5Q9BXJ0 243 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 TCFL5Q9UL49 500 aa12.28□□□□□ -0.44
ERCC3-202ENST00000426778 TRAPPC2LH3BP13 241 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 AP4M1O00189 453 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 PITX3O75364 302 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 SRP19P09132 144 aaKnown RBP12.27□□□□□ -0.44
ERCC3-202ENST00000426778 METTL15P1P0C7V9 234 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 CYB561P49447 251 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 RAB5CP51148 216 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 PCBD1P61457 104 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 RPL23AP62750 156 aaKnown RBP12.27□□□□□ -0.44
ERCC3-202ENST00000426778 ZXDAP98168 799 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 RHEBQ15382 184 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 NMSQ5H8A3 153 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 LINC00696Q6ZRV3 163 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 COMMD1Q8N668 190 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 EDARADDQ8WWZ3 215 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 CLDN23Q96B33 292 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 LRFN1Q9P244 771 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 WSB1Q9Y6I7 421 aa12.27□□□□□ -0.44
ERCC3-202ENST00000426778 PGLYRP1O75594 196 aaPredicted RBP12.27□□□□□ -0.45
ERCC3-202ENST00000426778 KRTAP27-1Q3LI81 207 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 TRIM61Q5EBN2 209 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 ZDHHC23Q8IYP9 409 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 HLA-CQ95604 372 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 TMEM56Q96MV1 263 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 IL36GQ9NZH8 169 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 METTL1Q9UBP6 276 aaKnown RBP12.27□□□□□ -0.45
ERCC3-202ENST00000426778 TMEM56-RWDD3S4R434 201 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 SCAF4O95104 1147 aaKnown RBP12.27□□□□□ -0.45
ERCC3-202ENST00000426778 NAPSAO96009 420 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 SMIM6P0DI80 62 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 MAGEA5P43359 124 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 RAB11AP62491 216 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 RAB1AP62820 205 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 HIKESHIQ53FT3 197 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 C9orf152Q5JTZ5 239 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 OR2T2Q6IF00 324 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 HEPN1Q6WQI6 88 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 SPNS3Q6ZMD2 512 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 SSX7Q7RTT5 188 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 WDR5BQ86VZ2 330 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 KCNE4Q8WWG9 221 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 GPR146Q96CH1 333 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 MUCL1Q96DR8 90 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 THOC3Q96J01 351 aaKnown RBP12.27□□□□□ -0.45
ERCC3-202ENST00000426778 ZNF251Q9BRH9 671 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 ZNF665Q9H7R5 613 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 FAM86C1Q9NVL1 165 aa12.27□□□□□ -0.45
ERCC3-202ENST00000426778 IFITM10A6NMD0 228 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 CYB5BO43169 146 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 HSPA12AO43301 675 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 PAX6P26367 422 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 OR2B11Q5JQS5 317 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 CCDC54Q8NEL0 328 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 REPIN1Q9BWE0 567 aaKnown RBP12.26□□□□□ -0.45
ERCC3-202ENST00000426778 SEBOXQ9HB31 216 aaPredicted RBP12.26□□□□□ -0.45
ERCC3-202ENST00000426778 RBM7Q9Y580 266 aaKnown RBP12.26□□□□□ -0.45
ERCC3-202ENST00000426778 CEP250Q9BV73 2442 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 BDP1A6H8Y1 2624 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 S100A8P05109 93 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 VDAC1P21796 283 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 CA6P23280 308 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 FGF12P61328 243 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 ARL16Q0P5N6 197 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 ZNF295-AS1Q8N0V1 137 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 CT55Q8WUE5 264 aa12.26□□□□□ -0.45
ERCC3-202ENST00000426778 SIRPB1O00241 398 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 CYTIPO60759 359 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 ELLP55199 621 aaPredicted RBP12.25□□□□□ -0.45
ERCC3-202ENST00000426778 GFRA1P56159 465 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 PCSK4Q6UW60 755 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 MKXQ8IYA7 352 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 PSMF1Q92530 271 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 SLC25A31Q9H0C2 315 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 CACNG5Q9UF02 275 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 KCNS2Q9ULS6 477 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 PPIHO43447 177 aaKnown RBP12.25□□□□□ -0.45
ERCC3-202ENST00000426778 TFF1P04155 84 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 SERPINE2P07093 398 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 EIF2S3P41091 472 aaKnown RBP12.25□□□□□ -0.45
ERCC3-202ENST00000426778 ID3Q02535 119 aa12.25□□□□□ -0.45
ERCC3-202ENST00000426778 ZFP36L1Q07352 338 aaKnown RBP12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms