RNA–Protein interactions for RNA: ENST00000426253.5

NIF3L1-207, Transcript of NGG1 interacting factor 3 like 1, humanhuman

TSL 5

Gene NIF3L1, Length 749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-207ENST00000426253 LIMS3P0CW19 117 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 LIMS4P0CW20 117 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 PIPP12273 146 aaPredicted RBP4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 CCL3L1P16619 93 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 PRKACAP17612 351 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 BCL3P20749 454 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 GABRR1P24046 479 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 DCKP27707 260 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 POU3F4P49335 361 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 ETV1P50549 477 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 GTF2A1P52655 376 aaPredicted RBP4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 SNU13P55769 128 aaKnown RBP4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 RAG2P55895 527 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 EDDM3BP56851 147 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 SCN1BQ07699 218 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 DCTN2Q13561 401 aaKnown RBP4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 ZNF273Q14593 569 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 TAF9Q16594 264 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 DEFB121Q5J5C9 76 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 ZNF691Q5VV52 312 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 HCP5Q6MZN7 132 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 TMPRSS11AQ6ZMR5 421 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 GDPGP1Q6ZNW5 385 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 DHRSXQ8N5I4 330 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 ZSCAN4Q8NAM6 433 aaPredicted RBP4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 OR13C9Q8NGT0 318 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 OR4F5Q8NH21 305 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 HAVCR2Q8TDQ0 301 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 WIPF2Q8TF74 440 aaPredicted RBP4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 TMEM170AQ8WVE7 144 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 CYGBQ8WWM9 190 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 RFT1Q96AA3 541 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 SPSB1Q96BD6 273 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 TMEM80Q96HE8 168 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 OPALINQ96PE5 141 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 SPACA5Q96QH8 159 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 PDCD1LG2Q9BQ51 273 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 HMG20AQ9NP66 347 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 C8orf4Q9NR00 106 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 PCDHB16Q9NRJ7 776 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 RBFOX1Q9NWB1 397 aaKnown RBP4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 CHCHD3Q9NX63 227 aaKnown RBP4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 BABAM2Q9NXR7 383 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 KIAA1456Q9P272 454 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 HSPB7Q9UBY9 170 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 GSTK1Q9Y2Q3 226 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 MMP24Q9Y5R2 645 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 DOCK11Q5JSL3 2073 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 WNK2Q9Y3S1 2297 aa4.99□□□□□ -1.61
NIF3L1-207ENST00000426253 IGKV1-12A0A0C4DH73 117 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 hADV38S2A0JD32 116 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 MEX3AA1L020 520 aaKnown RBP4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 CLPSL1A2RUU4 121 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 DPPA5A6NC42 116 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 TMEM212A6NML5 194 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 C17orf98A8MV24 154 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 ANKRD65E5RJM6 399 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 DEGS1O15121 323 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 MAGEB3O15480 346 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 NDUFA7O95182 113 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 IL1AP01583 271 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 IGKV1D-12P01611 117 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 HCKP08631 526 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 ZNF728P0DKX0 622 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 RAB3AP20336 220 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 COX7A1P24310 79 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 SAA4P35542 130 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 TGFBR2P37173 567 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 ADARB1P78563 741 aaKnown RBP4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 MEF2CQ06413 473 aaPredicted RBP4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 MED21Q13503 144 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 EDDM3AQ14507 147 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 ZNF146Q15072 292 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 RCN1Q15293 331 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 KISS1Q15726 138 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 GRK1Q15835 563 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 CCDC58Q4VC31 144 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 SPIN3Q5JUX0 258 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 CASC10Q5T4H9 136 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 OR2G6Q5TZ20 316 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 OLFML2AQ68BL7 652 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 RPL22L1Q6P5R6 122 aaKnown RBP4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 SATL1Q86VE3 508 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 SAXO1Q8IYX7 474 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 OR8H2Q8N162 312 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 PARP16Q8N5Y8 322 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 PACRGLQ8N7B6 248 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 TPRX1Q8N7U7 411 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 OR4S1Q8NGB4 309 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 OR13D1Q8NGV5 346 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 OR5R1Q8NH85 324 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 CNIH3Q8TBE1 160 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 TSEN15Q8WW01 171 aaKnown RBP4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 GGHQ92820 318 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 GPER1Q99527 375 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 SSX3Q99909 188 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 CHST6Q9GZX3 395 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 GHITMQ9H3K2 345 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 RHOFQ9HBH0 211 aa4.98□□□□□ -1.61
NIF3L1-207ENST00000426253 EXOSC4Q9NPD3 245 aaKnown RBP4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms