RNA–Protein interactions for RNA: ENST00000426246.2

USP42-203, Transcript of ubiquitin specific peptidase 42, humanhuman

TSL 2

Gene USP42, Length 3,611 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-203ENST00000426246 HIST2H3PS2Q5TEC6 136 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 M1APQ8TC57 530 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 TAAR9Q96RI9 348 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 TMEM9BQ9NQ34 198 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 DEPPQ9NTK1 212 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 CD300LBA8K4G0 201 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 PSG2P11465 335 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 LSM6P62312 80 aaKnown RBP11.5□□□□□ -0.57
USP42-203ENST00000426246 VHLLQ6RSH7 139 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 BTNL3Q6UXE8 466 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 PIP4P1Q86T03 277 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 LYPD6Q86Y78 171 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 TMEM204Q9BSN7 226 aa11.5□□□□□ -0.57
USP42-203ENST00000426246 TAAR5O14804 337 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 RHBDL1O75783 438 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 VAMP5O95183 116 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 TMEM187Q14656 261 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 RAB35Q15286 201 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 ZPBPQ9BS86 351 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 PROK2Q9HC23 129 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 CACNG5Q9UF02 275 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 TCFL5Q9UL49 500 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 RAB5AP20339 215 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 WDR25Q64LD2 544 aaPredicted RBP11.49□□□□□ -0.57
USP42-203ENST00000426246 LHFPL1Q86WI0 220 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 OR10D4PQ8NGN7 298 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 OR2V1Q8NHB1 315 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 CT55Q8WUE5 264 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 NABP1Q96AH0 204 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 WNT5BQ9H1J7 359 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 TGIF2-C20orf24A0A0A6YYL0 155 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 LOC102725191A0A1B0GVB3 256 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 KIAA1324LA8MWY0 1029 aaPredicted RBP11.49□□□□□ -0.57
USP42-203ENST00000426246 GPR137BO60478 399 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 S100GP29377 79 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 RAC3P60763 192 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 ARL6IP1Q15041 203 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 USF2Q15853 346 aaPredicted RBP11.49□□□□□ -0.57
USP42-203ENST00000426246 ZNF429Q86V71 674 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 OR10V1Q8NGI7 309 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 ZNF665Q9H7R5 613 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 PLEKHA2Q9HB19 425 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 OR1A1Q9P1Q5 309 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 DNAJB11Q9UBS4 358 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 GAB2Q9UQC2 676 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 WSB1Q9Y6I7 421 aa11.49□□□□□ -0.57
USP42-203ENST00000426246 COLCA2A8K830 154 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 ZNF705GA8MUZ8 300 aaPredicted RBP11.48□□□□□ -0.57
USP42-203ENST00000426246 TPPPO94811 219 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 ALDH3B1P43353 468 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 NUBP1P53384 320 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 RAB2AP61019 212 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 TCF15Q12870 199 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 EXT1Q16394 746 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 SLC25A53Q5H9E4 307 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 FAM27BQ5VT28 67 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 DHRS7BQ6IAN0 325 aaPredicted RBP11.48□□□□□ -0.57
USP42-203ENST00000426246 C6orf15Q6UXA7 325 aaPredicted RBP11.48□□□□□ -0.57
USP42-203ENST00000426246 LHFPL2Q6ZUX7 228 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 OR10J5Q8NHC4 309 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 TCTEX1D2Q8WW35 142 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 SLC35B3Q9H1N7 401 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 IFT22Q9H7X7 185 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 GPR35Q9HC97 309 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 MYOZ1Q9NP98 299 aaPredicted RBP11.48□□□□□ -0.57
USP42-203ENST00000426246 CACFD1Q9UGQ2 172 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 H3BQ15 152 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 EGR1P18146 543 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 SNCAP37840 140 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 GFI1BQ5VTD9 330 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 TMEM252Q8N6L7 170 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 STRADBQ9C0K7 418 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 OPA3Q9H6K4 179 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 OBP2BQ9NPH6 170 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 TREM2Q9NZC2 230 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 ZNF107Q9UII5 783 aaPredicted RBP11.48□□□□□ -0.57
USP42-203ENST00000426246 ARPC4-TTLL3A0A0A6YYG9 625 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 UBE2L5PA0A1B0GUS4 154 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 GJE1A6NN92 205 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 LYZL6O75951 148 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 MT-CO3P00414 261 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 CD63P08962 238 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 FABP6P51161 128 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 FUT6P51993 359 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 UBE2G2P60604 165 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 ERVS71-1P61550 626 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 RHEBQ15382 184 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 FADS6Q8N9I5 356 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 HPSE2Q8WWQ2 592 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 SPSB1Q96BD6 273 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 SAT2Q96F10 170 aaPredicted RBP11.48□□□□□ -0.57
USP42-203ENST00000426246 RHOVQ96L33 236 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 NIPSNAP3BQ9BS92 247 aa11.48□□□□□ -0.57
USP42-203ENST00000426246 MAP1AP78559 2803 aaPredicted RBP11.47□□□□□ -0.57
USP42-203ENST00000426246 ANKRD30BLA7E2S9 258 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 NXPH2O95156 264 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 SNRPCP09234 159 aaKnown RBP11.47□□□□□ -0.57
USP42-203ENST00000426246 HLA-GP17693 338 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 RND3P61587 244 aa11.47□□□□□ -0.57
USP42-203ENST00000426246 DLK1P80370 383 aa11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms