RNA–Protein interactions for RNA: ENST00000426155.6

SNX3-204, Transcript of sorting nexin 3, humanhuman

TSL 1 (best) BASIC

Gene SNX3, Length 1,072 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-204ENST00000426155 BLOC1S6Q9UL45 172 aa10.98□□□□□ -0.65
SNX3-204ENST00000426155 TCF19Q9Y242 345 aa10.98□□□□□ -0.65
SNX3-204ENST00000426155 RNF114Q9Y508 228 aa10.98□□□□□ -0.65
SNX3-204ENST00000426155 A0A1W2PPE3 182 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 TMEM30CPA0ZSE6 113 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 POM121CA8CG34 1229 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 VSIG8P0DPA2 414 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 HTR1DP28221 377 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 CD34P28906 385 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 KCNJ3P48549 501 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 PROK1P58294 105 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 GABARAPL2P60520 117 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 EMX1Q04741 257 aaPredicted RBP10.97□□□□□ -0.65
SNX3-204ENST00000426155 UNC119Q13432 240 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 P2RY14Q15391 338 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 HLA-DRB5Q30154 266 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 MINOS1Q5TGZ0 78 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 GLT8D1Q68CQ7 371 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 HIST2H2BDQ6DRA6 164 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 OR52W1Q6IF63 320 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 ZNF565Q8N9K5 539 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 NICN1Q9BSH3 213 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 PCDHB16Q9NRJ7 776 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 ABCB10Q9NRK6 738 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 AK6Q9Y3D8 172 aaKnown RBP10.97□□□□□ -0.65
SNX3-204ENST00000426155 PEX16Q9Y5Y5 336 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 MINOS1-NBL1R4GNA1 71 aa10.97□□□□□ -0.65
SNX3-204ENST00000426155 A0A087X0M5 115 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 A0A1B0GX30 115 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 UBE2QL1A1L167 161 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 A6NDX4 124 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 NPIPB11E5RHQ5 1161 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 AIPO00170 330 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 F2RL2O00254 374 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 TOR1AO14656 332 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 TSPAN9O75954 239 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 HTR2CP28335 458 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 GABRA5P31644 462 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 NKAPLQ5M9Q1 402 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 C1orf100Q5SVJ3 147 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 ZNF497Q6ZNH5 498 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 C5orf24Q7Z6I8 188 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 OR4K15Q8NH41 348 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 ZNF596Q8TC21 504 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 MRPS24Q96EL2 167 aaKnown RBP10.96□□□□□ -0.65
SNX3-204ENST00000426155 NCOR1P1Q9H4R4 102 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 C16orf95Q9H693 158 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 DPM3Q9P2X0 92 aa10.96□□□□□ -0.65
SNX3-204ENST00000426155 IGHV3-43A0A0B4J1X8 118 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 A0A1B0GUS0 222 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 SHISA3A0PJX4 238 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 MCRIP1C9JLW8 97 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 C15orf65H3BRN8 121 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 BUB1B-PAK6H3BSN5 160 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 SLC22A1O15245 554 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 MT-ND4P03905 459 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 IGHV3-43DP0DP04 118 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 PSMA1P25786 263 aaKnown RBP10.95□□□□□ -0.66
SNX3-204ENST00000426155 CLDN12P56749 244 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 DIAPH2-AS1Q14236 149 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 HABP2Q14520 560 aaPredicted RBP10.95□□□□□ -0.66
SNX3-204ENST00000426155 TRAM1Q15629 374 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 TPTE2P1Q5T6R2 138 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 SPARTQ8N0X7 666 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 OR9G1Q8NH87 305 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 CST11Q9H112 138 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 MMP28Q9H239 520 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 LINC00574Q9H8X3 128 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 SPACA1Q9HBV2 294 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 PSG11Q9UQ72 335 aa10.95□□□□□ -0.66
SNX3-204ENST00000426155 A0A0A6YYD4 124 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 LEUTXA8MZ59 168 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 C12orf77C9JDV5 145 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 LY6LH3BQJ8 138 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 J3QR06 171 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 PDCD6O75340 191 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 SMIM18P0DKX4 95 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 CD37P11049 281 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 RCC1P18754 421 aaPredicted RBP10.94□□□□□ -0.66
SNX3-204ENST00000426155 RANBP1P43487 201 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 RPS27AP62979 156 aaKnown RBP10.94□□□□□ -0.66
SNX3-204ENST00000426155 QRFPP83859 136 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 DCTN2Q13561 401 aaKnown RBP10.94□□□□□ -0.66
SNX3-204ENST00000426155 SYT6Q5T7P8 510 aaPredicted RBP10.94□□□□□ -0.66
SNX3-204ENST00000426155 PRR18Q8N4B5 295 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 OR6M1Q8NGM8 313 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 OR4C13Q8NGP0 309 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 ARL11Q969Q4 196 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 CITED1Q99966 193 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 SULT4A1Q9BR01 284 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 TMEM59Q9BXS4 323 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 ZNF702PQ9H963 129 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 PLGRKTQ9HBL7 147 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 NDUFB11Q9NX14 153 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 GHRLQ9UBU3 117 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 VWFP04275 2813 aa10.94□□□□□ -0.66
SNX3-204ENST00000426155 TET2Q6N021 2002 aaPredicted RBP10.93□□□□□ -0.66
SNX3-204ENST00000426155 FAM90A10PA6NDY2 464 aa10.93□□□□□ -0.66
SNX3-204ENST00000426155 FAM90A18PA6NE21 464 aa10.93□□□□□ -0.66
SNX3-204ENST00000426155 FAM90A16PA6NEW6 464 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms