RNA–Protein interactions for RNA: ENST00000425876.6

CDK3-201, Transcript of cyclin dependent kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDK3, Length 1,582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK3-201ENST00000425876 ZNF737O75373 536 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 ZNF205O95201 554 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 RBMXP38159 391 aaKnown RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 RND3P61587 244 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 IFITM2Q01629 132 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 FGL1Q08830 312 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 TESK1Q15569 626 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 SLC9A3R2Q15599 337 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 ANKRD55Q3KP44 614 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 KCTD9Q7L273 389 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 CD177Q8N6Q3 437 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 OR11L1Q8NGX0 322 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 OR10J5Q8NHC4 309 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 PPP1R35Q8TAP8 253 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 RTN4IP1Q8WWV3 396 aaPredicted RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 VRK1Q99986 396 aaPredicted RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 TMEM246Q9BRR3 403 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 GON7Q9BXV9 100 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 NAA60Q9H7X0 242 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 SLC2A9Q9NRM0 540 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 PLSCR3Q9NRY6 295 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 DNAJB11Q9UBS4 358 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 HSPB11Q9Y547 144 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 HELZ2Q9BYK8 2649 aaKnown RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 IGKV1D-17A0A075B6S4 117 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 TEX13DA0A0J9YY54 714 aaPredicted RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 M0R233 179 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 APOBEC3AP31941 199 aaPredicted RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 CYCSP99999 105 aaKnown RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 EFNB3Q15768 340 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 H1FOOQ8IZA3 346 aaPredicted RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 LINC01560Q8TB33 94 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 WDR89Q96FK6 387 aaPredicted RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 COQ2Q96H96 371 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 SNX22Q96L94 193 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 SUCNR1Q9BXA5 334 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 SHARPINQ9H0F6 387 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 SLA2Q9H6Q3 261 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 KCNIP1Q9NZI2 227 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 PAIP2BQ9ULR5 123 aaKnown RBP12.09□□□□□ -0.47
CDK3-201ENST00000425876 OR2W1Q9Y3N9 320 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 NBASA2RRP1 2371 aa12.09□□□□□ -0.47
CDK3-201ENST00000425876 OOEPA6NGQ2 149 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 GNRHRP30968 328 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 TLE1Q04724 770 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 TFF3Q07654 80 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 C6orf183Q5T699 404 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 TRAT1Q6PIZ9 186 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 GSG1LQ6UXU4 331 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 C5orf24Q7Z6I8 188 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 LDLRAD3Q86YD5 345 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 ZNF565Q8N9K5 539 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 GALNT11Q8NCW6 608 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 ANGPTL6Q8NI99 470 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 KIRREL1Q96J84 757 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 EGLN1Q9GZT9 426 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 NCOR1P1Q9H4R4 102 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 TAF9BQ9HBM6 251 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 KIF25Q9UIL4 384 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 PPP1R3CQ9UQK1 317 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 RNF115Q9Y4L5 304 aa12.08□□□□□ -0.48
CDK3-201ENST00000425876 GCN1Q92616 2671 aaKnown RBP12.08□□□□□ -0.48
CDK3-201ENST00000425876 ICE1Q9Y2F5 2266 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 ANKHD1Q8IWZ3 2542 aaKnown RBP12.07□□□□□ -0.48
CDK3-201ENST00000425876 ADGRG4Q8IZF6 3080 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 TUBAL3A6NHL2 446 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 B9A039 149 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 GPR31O00270 319 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 MGST3O14880 152 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 HEXAP06865 529 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 IRF2P14316 349 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 AGAP20933 346 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 GRNP28799 593 aaKnown RBP12.07□□□□□ -0.48
CDK3-201ENST00000425876 HOXA4Q00056 320 aaPredicted RBP12.07□□□□□ -0.48
CDK3-201ENST00000425876 AESQ08117 197 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 CDSNQ15517 529 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 LGALSLQ3ZCW2 172 aaPredicted RBP12.07□□□□□ -0.48
CDK3-201ENST00000425876 C4orf17Q53FE4 359 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 ZNF808Q8N4W9 903 aaPredicted RBP12.07□□□□□ -0.48
CDK3-201ENST00000425876 LRTM2Q8N967 370 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 ASCC1Q8N9N2 400 aaKnown RBP12.07□□□□□ -0.48
CDK3-201ENST00000425876 LURAP1Q96LR2 239 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 PDCD10Q9BUL8 212 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 NMES1Q9C002 83 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 SLC5A7Q9GZV3 580 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 TOLLIPQ9H0E2 274 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 MS4A5Q9H3V2 200 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 METRNQ9UJH8 293 aa12.07□□□□□ -0.48
CDK3-201ENST00000425876 CCSO14618 274 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 MUC1P15941 1255 aaPredicted RBP12.06□□□□□ -0.48
CDK3-201ENST00000425876 C4BPBP20851 252 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 TMEM187Q14656 261 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 PHLDA2Q53GA4 152 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 KRBOX4Q5JUW0 171 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 TEX36Q5VZQ5 186 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 BOLLQ8N9W6 283 aaKnown RBP12.06□□□□□ -0.48
CDK3-201ENST00000425876 GRPEL2Q8TAA5 225 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 SDSLQ96GA7 329 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 COMMD9Q9P000 198 aa12.06□□□□□ -0.48
CDK3-201ENST00000425876 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms