RNA–Protein interactions for RNA: ENST00000424804.6

VRK3-203, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 1,061 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-203ENST00000424804 TRAM1Q15629 374 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 TBCEQ15813 527 aaPredicted RBP10.39□□□□□ -0.75
VRK3-203ENST00000424804 MPV17LQ2QL34 196 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 NSUN5P1Q3KNT7 163 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 NKAPLQ5M9Q1 402 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 OR52W1Q6IF63 320 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 OR10K2Q6IF99 312 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 LINC00596Q86U02 117 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 LRRTM1Q86UE6 522 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 CDH26Q8IXH8 852 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 ABHD12Q8N2K0 398 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 SVOPQ8N4V2 548 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 ZNF565Q8N9K5 539 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 TMEM104Q8NE00 496 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 Q8NFD4 153 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 RFESDQ8TAC1 157 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 UBALD1Q8TB05 177 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 CORO2AQ92828 525 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 FOXRED1Q96CU9 486 aaPredicted RBP10.39□□□□□ -0.75
VRK3-203ENST00000424804 KCNK15Q9H427 330 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 PLGRKTQ9HBL7 147 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 ISYNA1Q9NPH2 558 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 ACOT13Q9NPJ3 140 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 CALYQ9NYX4 217 aa10.39□□□□□ -0.75
VRK3-203ENST00000424804 AK6Q9Y3D8 172 aaKnown RBP10.39□□□□□ -0.75
VRK3-203ENST00000424804 TMEM30CPA0ZSE6 113 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 UBE2QL1A1L167 161 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 MCRIP1C9JLW8 97 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 DENRO43583 198 aaKnown RBP10.38□□□□□ -0.75
VRK3-203ENST00000424804 FBXO24O75426 580 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 ARL6IP5O75915 188 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 UCHL1P09936 223 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 PSMA1P25786 263 aaKnown RBP10.38□□□□□ -0.75
VRK3-203ENST00000424804 CALRP27797 417 aaKnown RBP10.38□□□□□ -0.75
VRK3-203ENST00000424804 PSMB9P28065 219 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 KCNJ3P48549 501 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 GABARAPL2P60520 117 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 FABP5Q01469 135 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 EMX1Q04741 257 aaPredicted RBP10.38□□□□□ -0.75
VRK3-203ENST00000424804 C17orf58Q2M2W7 97 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 TMEM95Q3KNT9 176 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 TCTEX1D4Q5JR98 221 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 NHLRC3Q5JS37 347 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 RSBN1Q5VWQ0 802 aaPredicted RBP10.38□□□□□ -0.75
VRK3-203ENST00000424804 RAB12Q6IQ22 244 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 HEPN1Q6WQI6 88 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 TMEM91Q6ZNR0 172 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 NDUFA11Q86Y39 141 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 WFDC9Q8NEX5 89 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 PHYHIPQ92561 330 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 LEAP2Q969E1 77 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 UQCC2Q9BRT2 126 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 CST11Q9H112 138 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 ZNF286AQ9HBT8 521 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 PEX16Q9Y5Y5 336 aa10.38□□□□□ -0.75
VRK3-203ENST00000424804 KBTBD11-OT1A0A1B0GTJ5 212 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 SC5DO75845 299 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 HTR1DP28221 377 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 HTR2CP28335 458 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 SSTR5P35346 364 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 GNG10P50151 68 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 CD83Q01151 205 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 P2RY14Q15391 338 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 RYR3Q15413 4870 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 OR4P4Q8NGL7 312 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 OR4K15Q8NH41 348 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 MRPS24Q96EL2 167 aaKnown RBP10.37□□□□□ -0.75
VRK3-203ENST00000424804 PRSS22Q9GZN4 317 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 SPACA1Q9HBV2 294 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 AURKAIP1Q9NWT8 199 aaPredicted RBP10.37□□□□□ -0.75
VRK3-203ENST00000424804 ETAA1Q9NY74 926 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 IDI2-AS1Q9NZ38 188 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 TRAPPC2LQ9UL33 140 aa10.37□□□□□ -0.75
VRK3-203ENST00000424804 AIPO00170 330 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 F2RL2O00254 374 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 IL1AP01583 271 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 UBBP0CG47 229 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 PRRX1P54821 245 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 SSX1Q16384 188 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 UTF1Q5T230 341 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 MINOS1Q5TGZ0 78 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 RTN4RL2Q86UN3 420 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 LYPD6Q86Y78 171 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 PRR18Q8N4B5 295 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 DTX3Q8N9I9 347 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 ZNF596Q8TC21 504 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 ARL11Q969Q4 196 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 PHF21AQ96BD5 680 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 R3HDM4Q96D70 268 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 KIRREL1Q96J84 757 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 CYYR1Q96J86 154 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 TMEM59Q9BXS4 323 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 IFT22Q9H7X7 185 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 GHRLQ9UBU3 117 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 MINOS1-NBL1R4GNA1 71 aa10.36□□□□□ -0.75
VRK3-203ENST00000424804 IGHV3-43A0A0B4J1X8 118 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 A0A1W2PPE3 182 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 AMY1AP04745 511 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 AMY2AP04746 511 aa10.35□□□□□ -0.75
VRK3-203ENST00000424804 IGHV3-43DP0DP04 118 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms