RNA–Protein interactions for RNA: ENST00000421141.5

PTCH1-206, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,659 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-206ENST00000421141 LHX2P50458 406 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 C10orf111Q8N326 155 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 BPIFCQ8NFQ6 507 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 ZNF486Q96H40 463 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-206ENST00000421141 SSTP61278 116 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 FGF12P61328 243 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 R3HDM4Q96D70 268 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 SNX22Q96L94 193 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 A0A0A6YYJ9 748 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 IL13RA2Q14627 380 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 CCDC28AQ8IWP9 274 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 ZNF835Q9Y2P0 537 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 DHRS7CA6NNS2 312 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 SNAPINO95295 136 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 GZMMP51124 257 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 TMEM182Q6ZP80 229 aaPredicted RBP9.3□□□□□ -0.92
PTCH1-206ENST00000421141 ANXA10Q9UJ72 324 aa9.3□□□□□ -0.92
PTCH1-206ENST00000421141 NQO2P16083 231 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 RBM11P57052 281 aaKnown RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 RHOBP62745 196 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 OPCMLQ14982 345 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 PARP11Q9NR21 331 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 OR4C45A6NMZ5 311 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 SIX6O95475 246 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 MC5RP33032 325 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 INSL4Q14641 139 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 GCSAMQ8N6F7 178 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 FAM210AQ96ND0 272 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 CACNG5Q9UF02 275 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 TUBD1Q9UJT1 453 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 RALYQ9UKM9 306 aaKnown RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 PRNDQ9UKY0 176 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 NKX2-6A6NCS4 301 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 SYNGR1O43759 233 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 S100A4P26447 101 aaKnown RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 SNRPNP63162 240 aaKnown RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 JMJD8Q96S16 334 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 SSBP3Q9BWW4 388 aaPredicted RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 PUS1Q9Y606 427 aaKnown RBP eCLIP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 DUS4LO95620 317 aaKnown RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 HTR1DP28221 377 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 SOHLH1Q5JUK2 328 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 OR1L4Q8NGR5 311 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 ADAT3Q96EY9 351 aaPredicted RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 DCTN5Q9BTE1 182 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 OR2W1Q9Y3N9 320 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 TMEM229AB2RXF0 380 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 OR5AC1P0C628 307 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 NRN1LQ496H8 165 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 KCNRGQ8N5I3 272 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 RCL1Q9Y2P8 373 aaKnown RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 RPL36A-HNRNPH2H7BZ11 118 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 KLF7O75840 302 aaPredicted RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 OPN1MWP04001 364 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 OPN1MW2P0DN77 364 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 OPN1MW3P0DN78 364 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 SNAI3Q3KNW1 292 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 SP6Q3SY56 376 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 TBC1D26Q86UD7 250 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 DUSP18Q8NEJ0 188 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 MARS2Q96GW9 593 aaKnown RBP9.29□□□□□ -0.92
PTCH1-206ENST00000421141 MTFP1Q9UDX5 166 aa9.29□□□□□ -0.92
PTCH1-206ENST00000421141 FCN2Q15485 313 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 SNRNP40Q96DI7 357 aaKnown RBP9.28□□□□□ -0.92
PTCH1-206ENST00000421141 SS18L1O75177 396 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-206ENST00000421141 HOXA4Q00056 320 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-206ENST00000421141 RPS4Y2Q8TD47 263 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 ITPKCQ96DU7 683 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 GNG13Q9P2W3 67 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 POMT1Q9Y6A1 747 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 ISG15P05161 165 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 LRRTM1Q86UE6 522 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 C17orf82Q86X59 251 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-206ENST00000421141 OR10AC1Q8NH08 325 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 SAT2Q96F10 170 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-206ENST00000421141 BSCL2Q96G97 398 aaPredicted RBP9.28□□□□□ -0.92
PTCH1-206ENST00000421141 PARD6AQ9NPB6 346 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 PTPRSQ13332 1948 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 SVBPQ8N300 66 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 ST6GALNAC3Q8NDV1 305 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 OR5H6Q8NGV6 325 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 GHITMQ9H3K2 345 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 CBLN4Q9NTU7 201 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 LHFPL6Q9Y693 200 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 K7ENP7 123 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 METTL15P1P0C7V9 234 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 OR1B1Q8NGR6 318 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 FAM222BQ8WU58 562 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 LHX4Q969G2 390 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 TAGLN2P37802 199 aaKnown RBP9.28□□□□□ -0.92
PTCH1-206ENST00000421141 MAGEB1P43366 347 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 PRSS53Q2L4Q9 553 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 C10orf128Q5T292 105 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 C9orf106Q8NAJ2 232 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 RBPMSQ93062 196 aaKnown RBP9.28□□□□□ -0.92
PTCH1-206ENST00000421141 SHANK1Q9Y566 2161 aa9.28□□□□□ -0.92
PTCH1-206ENST00000421141 H3BP45 60 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 PRSS23O95084 383 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 MPV17P39210 176 aa9.27□□□□□ -0.92
PTCH1-206ENST00000421141 PHYHD1Q5SRE7 291 aa9.27□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms