RNA–Protein interactions for RNA: ENST00000420813.5

MSH6-203, Transcript of mutS homolog 6, humanhuman

TSL 4

Gene MSH6, Length 491 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-203ENST00000420813 WBP4O75554 376 aaKnown RBP13.73□□□□□ -0.21
MSH6-203ENST00000420813 IGKV1D-33P01593 117 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 IGKV1-33P01594 117 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 IGHG2P01859 326 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 BDKRB2P30411 391 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 ETV1P50549 477 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 ETV3LQ6ZN32 361 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 LINC00311Q8N616 119 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 C8orf31Q8N9H6 132 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 SMIM19Q96E16 107 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 S100A13Q99584 98 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 ZNF581Q9P0T4 197 aa13.73□□□□□ -0.21
MSH6-203ENST00000420813 TRAV39A0A0B4J263 110 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 IGHV1-3A0A0C4DH29 117 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 SERPINE3A8MV23 424 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 GEMIN2O14893 280 aaKnown RBP13.72□□□□□ -0.21
MSH6-203ENST00000420813 OGG1O15527 345 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 GAPDHP04406 335 aaKnown RBP13.72□□□□□ -0.21
MSH6-203ENST00000420813 SERPINA2P20848 420 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 THBS3P49746 956 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 SLC35B1P78383 322 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 HNF4GQ14541 408 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 SMN1Q16637 294 aaKnown RBP13.72□□□□□ -0.21
MSH6-203ENST00000420813 OR2G6Q5TZ20 316 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 OR2W3Q7Z3T1 314 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 SLC35E3Q7Z769 313 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 FOXRED2Q8IWF2 684 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 MRPL41Q8IXM3 137 aaKnown RBP13.72□□□□□ -0.21
MSH6-203ENST00000420813 IZUMO1Q8IYV9 350 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 ZNF555Q8NEP9 628 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 DPF1Q92782 380 aa13.72□□□□□ -0.21
MSH6-203ENST00000420813 NOL4LQ96MY1 436 aaPredicted RBP13.72□□□□□ -0.21
MSH6-203ENST00000420813 SMPD3Q9NY59 655 aaPredicted RBP13.72□□□□□ -0.21
MSH6-203ENST00000420813 C15orf65H3BRN8 121 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 CCRL2O00421 344 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 ORC5O43913 435 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 GPX5O75715 221 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 IGFBP3P17936 291 aaPredicted RBP13.71□□□□□ -0.21
MSH6-203ENST00000420813 KRTAP10-11P60412 298 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 RIPK1Q13546 671 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 Q3ZCU0 254 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 TGIF2LXQ8IUE1 241 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 ARL11Q969Q4 196 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 MCRIP2Q9BUT9 160 aaKnown RBP13.71□□□□□ -0.21
MSH6-203ENST00000420813 GFOD1Q9NXC2 390 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 BABAM2Q9NXR7 383 aa13.71□□□□□ -0.21
MSH6-203ENST00000420813 DIMT1Q9UNQ2 313 aaKnown RBP13.71□□□□□ -0.21
MSH6-203ENST00000420813 EXOSC1Q9Y3B2 195 aaKnown RBP13.71□□□□□ -0.21
MSH6-203ENST00000420813 SIRT4Q9Y6E7 314 aaPredicted RBP13.71□□□□□ -0.21
MSH6-203ENST00000420813 TRBV5-5A0A0J9YX44 114 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 A0A1W2PPE3 182 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 WI2-2373I1.2A0A1W2PRP0 233 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 SDCBPO00560 298 aaPredicted RBP13.7□□□□□ -0.22
MSH6-203ENST00000420813 GTF2F2P13984 249 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 MYL12AP19105 171 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 MYCNOSP40205 109 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 GPR176Q14439 515 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 ATAD3CQ5T2N8 411 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 ZNF497Q6ZNH5 498 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 MOB3BQ86TA1 216 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 STPG2Q8N412 459 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 Q8N6K4 173 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 OR2T10Q8NGZ9 312 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 ST6GALNAC6Q969X2 333 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 EAF1Q96JC9 268 aaPredicted RBP13.7□□□□□ -0.22
MSH6-203ENST00000420813 ZNF184Q99676 751 aaPredicted RBP13.7□□□□□ -0.22
MSH6-203ENST00000420813 SPACA1Q9HBV2 294 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 LIN7CQ9NUP9 197 aaKnown RBP13.7□□□□□ -0.22
MSH6-203ENST00000420813 CKLFQ9UBR5 152 aa13.7□□□□□ -0.22
MSH6-203ENST00000420813 AP4M1O00189 453 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 MT-ND4P03905 459 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 FSTP19883 344 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 IL3RAP26951 378 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 TMEM30BQ3MIR4 351 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 Q499Y3 187 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 SLC22A6Q4U2R8 563 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 YIF1BQ5BJH7 314 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 DMKNQ6E0U4 476 aaPredicted RBP13.69□□□□□ -0.22
MSH6-203ENST00000420813 C8orf86Q6ZUL3 223 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 STX19Q8N4C7 294 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 NEK7Q8TDX7 302 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 RTN4IP1Q8WWV3 396 aaPredicted RBP13.69□□□□□ -0.22
MSH6-203ENST00000420813 GHSRQ92847 366 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 MRPS24Q96EL2 167 aaKnown RBP13.69□□□□□ -0.22
MSH6-203ENST00000420813 P2RX4Q99571 388 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 GON7Q9BXV9 100 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 ABCG5Q9H222 651 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 RAB9BQ9NP90 201 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 RCC2Q9P258 522 aaKnown RBP13.69□□□□□ -0.22
MSH6-203ENST00000420813 LINC00527Q9UJ94 153 aa13.69□□□□□ -0.22
MSH6-203ENST00000420813 A0A1W2PP11 408 aa13.68□□□□□ -0.22
MSH6-203ENST00000420813 NUDT19A8MXV4 375 aa13.68□□□□□ -0.22
MSH6-203ENST00000420813 AIPO00170 330 aa13.68□□□□□ -0.22
MSH6-203ENST00000420813 TXNL1O43396 289 aa13.68□□□□□ -0.22
MSH6-203ENST00000420813 LALBAP00709 142 aa13.68□□□□□ -0.22
MSH6-203ENST00000420813 CD1BP29016 333 aa13.68□□□□□ -0.22
MSH6-203ENST00000420813 HOXD3P31249 432 aaPredicted RBP13.68□□□□□ -0.22
MSH6-203ENST00000420813 REG1BP48304 166 aa13.68□□□□□ -0.22
MSH6-203ENST00000420813 MED21Q13503 144 aa13.68□□□□□ -0.22
MSH6-203ENST00000420813 VAX1Q5SQQ9 334 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms