RNA–Protein interactions for RNA: ENST00000419981.1

PTCD1-202, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 4

Gene PTCD1, Length 533 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-202ENST00000419981 ZNF581Q9P0T4 197 aa13.66□□□□□ -0.22
PTCD1-202ENST00000419981 LINC00527Q9UJ94 153 aa13.66□□□□□ -0.22
PTCD1-202ENST00000419981 IGHV1-3A0A0C4DH29 117 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 TMEM30CPA0ZSE6 113 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 CCRL2O00421 344 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 GAPDHP04406 335 aaKnown RBP13.65□□□□□ -0.22
PTCD1-202ENST00000419981 GZMHP20718 246 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 SERPINA2P20848 420 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 ZNF93P35789 620 aaPredicted RBP13.65□□□□□ -0.22
PTCD1-202ENST00000419981 XAF1Q6GPH4 301 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 C18orf65Q6ZTR6 163 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 MOB3BQ86TA1 216 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 C10orf67Q8IYJ2 551 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 STPG2Q8N412 459 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 APH1BQ8WW43 257 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 SLC29A1Q99808 456 aa13.65□□□□□ -0.22
PTCD1-202ENST00000419981 FGF20Q9NP95 211 aaPredicted RBP13.65□□□□□ -0.22
PTCD1-202ENST00000419981 PAK1IP1Q9NWT1 392 aaPredicted RBP13.65□□□□□ -0.22
PTCD1-202ENST00000419981 GEMIN2O14893 280 aaKnown RBP13.64□□□□□ -0.23
PTCD1-202ENST00000419981 BDKRB2P30411 391 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 MYCNOSP40205 109 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 REG1BP48304 166 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 EBI3Q14213 229 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 MPV17LQ2QL34 196 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 ATAD3CQ5T2N8 411 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 C11orf87Q6NUJ2 197 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 IZUMO1Q8IYV9 350 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 OR52M1Q8NGK5 317 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 NEK7Q8TDX7 302 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 ARL11Q969Q4 196 aa13.64□□□□□ -0.23
PTCD1-202ENST00000419981 IGHV3-72A0A0B4J1Y9 119 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 C15orf65H3BRN8 121 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 SDCBPO00560 298 aaPredicted RBP13.63□□□□□ -0.23
PTCD1-202ENST00000419981 IL3RAP26951 378 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 ETV1P50549 477 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 SMN1Q16637 294 aaKnown RBP13.63□□□□□ -0.23
PTCD1-202ENST00000419981 OR2G6Q5TZ20 316 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 TMPRSS11AQ6ZMR5 421 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 TGIF2LXQ8IUE1 241 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 LINC00311Q8N616 119 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 OR2T10Q8NGZ9 312 aa13.63□□□□□ -0.23
PTCD1-202ENST00000419981 EAF1Q96JC9 268 aaPredicted RBP13.63□□□□□ -0.23
PTCD1-202ENST00000419981 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.63□□□□□ -0.23
PTCD1-202ENST00000419981 NCBP2LA6PVI3 153 aaKnown RBP13.62□□□□□ -0.23
PTCD1-202ENST00000419981 AP4M1O00189 453 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 ORC5O43913 435 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 ZNF780AO75290 641 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-202ENST00000419981 DCKP27707 260 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 CD69Q07108 199 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 RIPK1Q13546 671 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 TEX38Q6PEX7 206 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 UNQ9370/PRO34162Q6UXP9 181 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 ZNF695Q8IW36 515 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 STX19Q8N4C7 294 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 C8orf31Q8N9H6 132 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 ZNF555Q8NEP9 628 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 UBALD1Q8TB05 177 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 CCDC107Q8WV48 283 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 RTN4IP1Q8WWV3 396 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-202ENST00000419981 ORAI1Q96D31 301 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 SMIM19Q96E16 107 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 P2RX4Q99571 388 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 ZNF184Q99676 751 aaPredicted RBP13.62□□□□□ -0.23
PTCD1-202ENST00000419981 ABCG5Q9H222 651 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 LIN7CQ9NUP9 197 aaKnown RBP13.62□□□□□ -0.23
PTCD1-202ENST00000419981 GFOD1Q9NXC2 390 aa13.62□□□□□ -0.23
PTCD1-202ENST00000419981 IGHV3-43A0A0B4J1X8 118 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 LINC01548A6NM66 108 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 AIPO00170 330 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 WBP4O75554 376 aaKnown RBP13.61□□□□□ -0.23
PTCD1-202ENST00000419981 IGHV3-43DP0DP04 118 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 GTF2F2P13984 249 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 GPR12P47775 334 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 DCTN2Q13561 401 aaKnown RBP13.61□□□□□ -0.23
PTCD1-202ENST00000419981 SLC22A6Q4U2R8 563 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 PQLC1Q8N2U9 271 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 Q8N6K4 173 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 Q8N9W7 124 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 OR13C5Q8NGS8 318 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 GON7Q9BXV9 100 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 S100A14Q9HCY8 104 aa13.61□□□□□ -0.23
PTCD1-202ENST00000419981 ZMAT5Q9UDW3 170 aaKnown RBP13.61□□□□□ -0.23
PTCD1-202ENST00000419981 SIRT4Q9Y6E7 314 aaPredicted RBP13.61□□□□□ -0.23
PTCD1-202ENST00000419981 A0A1W2PP11 408 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 IRGMA1A4Y4 181 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 OGG1O15527 345 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 MOSP00540 346 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 IGFBP3P17936 291 aaPredicted RBP13.6□□□□□ -0.23
PTCD1-202ENST00000419981 MYL12AP19105 171 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 CD1BP29016 333 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 GPR176Q14439 515 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 Q3ZCU0 254 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 ZNF497Q6ZNH5 498 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 ST6GALNAC6Q969X2 333 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 B9D2Q9BPU9 175 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 RAB9BQ9NP90 201 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 SMPD3Q9NY59 655 aaPredicted RBP13.6□□□□□ -0.23
PTCD1-202ENST00000419981 CKLFQ9UBR5 152 aa13.6□□□□□ -0.23
PTCD1-202ENST00000419981 EXOSC1Q9Y3B2 195 aaKnown RBP13.6□□□□□ -0.23
PTCD1-202ENST00000419981 TRBV5-5A0A0J9YX44 114 aa13.59□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms