RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 FAM90A10PA6NDY2 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A18PA6NE21 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A16PA6NEW6 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A20PA6NIJ5 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A7PA6NKC0 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A12PA8MX19 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A5PA8MXJ8 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A23PA8MXZ1 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 C15orf65H3BRN8 121 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 ORC5O43913 435 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 CRTAPO75718 401 aaPredicted RBP13.18□□□□□ -0.3
LINC00404-201ENST00000418660 IGHV3-7P01780 117 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A15PP0C7V4 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A13PP0C7W8 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A14PP0C7W9 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A24PP0C7X0 464 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 MGMTP16455 207 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 GP2P55259 537 aaKnown RBP13.18□□□□□ -0.3
LINC00404-201ENST00000418660 INSL4Q14641 139 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 ARSJQ5FYB0 599 aaPredicted RBP13.18□□□□□ -0.3
LINC00404-201ENST00000418660 OR52M1Q8NGK5 317 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 CCDC107Q8WV48 283 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 CAPSLQ8WWF8 208 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 PHYHIPQ92561 330 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 TOMM40LQ969M1 308 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 ARL11Q969Q4 196 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 RPEQ96AT9 228 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 RBM14Q96PK6 669 aaKnown RBP13.18□□□□□ -0.3
LINC00404-201ENST00000418660 SLC25A33Q9BSK2 321 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 SELENOIQ9C0D9 397 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 WNT10AQ9GZT5 417 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 BANF2Q9H503 90 aa13.18□□□□□ -0.3
LINC00404-201ENST00000418660 AIPO00170 330 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 PEX14O75381 377 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 OR2F2O95006 317 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 GLAP06280 429 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 VDAC2P45880 294 aaPredicted RBP13.17□□□□□ -0.3
LINC00404-201ENST00000418660 GNG10P50151 68 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 MADCAM1Q13477 382 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 FAM27D1Q5T7N8 215 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 RAB12Q6IQ22 244 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 THNSL2Q86YJ6 484 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 TMEM104Q8NE00 496 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 FAM110DQ8TAY7 271 aaPredicted RBP13.17□□□□□ -0.3
LINC00404-201ENST00000418660 WIPF2Q8TF74 440 aaPredicted RBP13.17□□□□□ -0.3
LINC00404-201ENST00000418660 Q96M66 194 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 OCSTAMPQ9BR26 566 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 ETAA1Q9NY74 926 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 PEX16Q9Y5Y5 336 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 MEGF8Q7Z7M0 2845 aa13.17□□□□□ -0.3
LINC00404-201ENST00000418660 ERICH4A6NGS2 130 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 FAM90A9PA6NNJ1 464 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 SDCBPO00560 298 aaPredicted RBP13.16□□□□□ -0.3
LINC00404-201ENST00000418660 WIPF1O43516 503 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 RGS10O43665 173 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 FBXO24O75426 580 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 SC5DO75845 299 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 UBBP0CG47 229 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 FAM106CPP0CH98 169 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 RAB7AP51149 207 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 HSD17B12Q53GQ0 312 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 FBLN7Q53RD9 439 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 GLT8D1Q68CQ7 371 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 HIST2H2BDQ6DRA6 164 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 CEACAM19Q7Z692 300 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 LRRTM1Q86UE6 522 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 GAPTQ8N292 157 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 OR10X1Q8NGY0 326 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 UFD1Q92890 307 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 CST11Q9H112 138 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 ISYNA1Q9NPH2 558 aa13.16□□□□□ -0.3
LINC00404-201ENST00000418660 TET2Q6N021 2002 aaPredicted RBP13.16□□□□□ -0.3
LINC00404-201ENST00000418660 KCNAB3O43448 404 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 CA11O75493 328 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 CD28P10747 220 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 SRMP19623 302 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 FUT3P21217 361 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 CRHBPP24387 322 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 HSPA13P48723 471 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 LOXL3P58215 753 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 DEFA6Q01524 100 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 TPBGQ13641 420 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 DIAPH2-AS1Q14236 149 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 RBM48Q5RL73 367 aaKnown RBP13.15□□□□□ -0.3
LINC00404-201ENST00000418660 C1orf100Q5SVJ3 147 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 SYT6Q5T7P8 510 aaPredicted RBP13.15□□□□□ -0.3
LINC00404-201ENST00000418660 LIPKQ5VXJ0 399 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 SIGIRRQ6IA17 410 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 OR8H3Q8N146 312 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 C8orf31Q8N9H6 132 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 RAB9BQ9NP90 201 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 GFOD1Q9NXC2 390 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 TRAPPC2LQ9UL33 140 aa13.15□□□□□ -0.3
LINC00404-201ENST00000418660 A0A1W2PPE3 182 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 A0A1W2PPI3 338 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 M0QZK8 103 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 AMY1AP04745 511 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 AMY2AP04746 511 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 UCHL1P09936 223 aa13.14□□□□□ -0.31
LINC00404-201ENST00000418660 CD37P11049 281 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 108.5 ms