RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 CLEC2LP0C7M8 214 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 SLC2A2P11168 524 aaPredicted RBP15.14■□□□□ 0.01
PTCD3-204ENST00000418628 RAB6AP20340 208 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 SSTR5P35346 364 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 TMEM50BP56557 158 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 SLC9A3R2Q15599 337 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 UTF1Q5T230 341 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 OR52W1Q6IF63 320 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 RBMS3Q6XE24 437 aaKnown RBP15.14■□□□□ 0.01
PTCD3-204ENST00000418628 Q6ZPA2 131 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 C6orf201Q7Z4U5 140 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 ZNF565Q8N9K5 539 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 BEND2Q8NDZ0 799 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 OR10A7Q8NGE5 316 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 MRPL30Q8TCC3 161 aaKnown RBP15.14■□□□□ 0.01
PTCD3-204ENST00000418628 NEK7Q8TDX7 302 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 CLEC7AQ9BXN2 247 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 HSF4Q9ULV5 492 aa15.14■□□□□ 0.01
PTCD3-204ENST00000418628 TBL2Q9Y4P3 447 aaKnown RBP15.14■□□□□ 0.01
PTCD3-204ENST00000418628 TRAV39A0A0B4J263 110 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 SOCS1O15524 211 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 ORC5O43913 435 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 AIREO43918 545 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 NAPSAO96009 420 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 IGLV1-47P01700 117 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 OMGP23515 440 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 TGFBR1P36897 503 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 IER3P46695 156 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 ALDH3B2P48448 385 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 EFNB2P52799 333 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 BAMBIQ13145 260 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 NKAPLQ5M9Q1 402 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 SLC16A12Q6ZSM3 486 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 OR4P4Q8NGL7 312 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 FAM216AQ8WUB2 273 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 NEDD4LQ96PU5 975 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 FUNDC2Q9BWH2 189 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 MEGF9Q9H1U4 602 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 ZNF286AQ9HBT8 521 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 RAB22AQ9UL26 194 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 POMT1Q9Y6A1 747 aa15.13■□□□□ 0.01
PTCD3-204ENST00000418628 UBE2QL1A1L167 161 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 TRIM77I1YAP6 450 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 HOXA3O43365 443 aaPredicted RBP15.12■□□□□ 0.01
PTCD3-204ENST00000418628 TFAP2AP05549 437 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 GZMHP20718 246 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 BLVRBP30043 206 aaPredicted RBP15.12■□□□□ 0.01
PTCD3-204ENST00000418628 ZNF880Q6PDB4 577 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 LHFPL4Q7Z7J7 247 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 ZNF554Q86TJ5 538 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 SSMEM1Q8WWF3 244 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 TMEM158Q8WZ71 300 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 IDI2-AS1Q9NZ38 188 aa15.12■□□□□ 0.01
PTCD3-204ENST00000418628 TRBV6-6A0A0A6YYG2 114 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 C12orf77C9JDV5 145 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 RAB27BO00194 218 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 F2RL2O00254 374 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 ARG1P05089 322 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 SCAND1P57086 179 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 LOXL3P58215 753 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 AANATQ16613 207 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 PLAC9Q5JTB6 97 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 MINOS1Q5TGZ0 78 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 TRAT1Q6PIZ9 186 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 DYNAPQ8N1N2 210 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.11■□□□□ 0.01
PTCD3-204ENST00000418628 OR56B1Q8NGI3 324 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 OR52M1Q8NGK5 317 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 MINOS1-NBL1R4GNA1 71 aa15.11■□□□□ 0.01
PTCD3-204ENST00000418628 ANK2Q01484 3957 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 VGLL3A8MV65 326 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 TMEM127O75204 238 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 GABARAPO95166 117 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 IGHV4-59P01825 116 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 RCC1P18754 421 aaPredicted RBP15.1■□□□□ 0.01
PTCD3-204ENST00000418628 VEGFCP49767 419 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 MXD1Q05195 221 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 HLA-DRB5Q30154 266 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 MOGAT2Q3SYC2 334 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 C6orf183Q5T699 404 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 ABHD12Q8N2K0 398 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 OR4K15Q8NH41 348 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 ZNF596Q8TC21 504 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 LGALS14Q8TCE9 139 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 ZDHHC16Q969W1 377 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 ARHGAP5-AS1Q96IT6 56 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 DUX5Q96PT3 197 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 FAAP24Q9BTP7 215 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 C19orf24Q9BVV8 132 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 DAPK2Q9UIK4 370 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 KCNK7Q9Y2U2 307 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 FAM96BQ9Y3D0 163 aa15.1■□□□□ 0.01
PTCD3-204ENST00000418628 FAM172BPA6NC97 362 aa15.09■□□□□ 0.01
PTCD3-204ENST00000418628 RNF212BA8MTL3 300 aa15.09■□□□□ 0.01
PTCD3-204ENST00000418628 MFNGO00587 321 aa15.09■□□□□ 0.01
PTCD3-204ENST00000418628 FAM189A2Q15884 450 aa15.09■□□□□ 0.01
PTCD3-204ENST00000418628 TMEM30BQ3MIR4 351 aa15.09■□□□□ 0.01
PTCD3-204ENST00000418628 ANKRD13BQ86YJ7 626 aa15.09■□□□□ 0.01
PTCD3-204ENST00000418628 CCDC107Q8WV48 283 aa15.09■□□□□ 0.01
PTCD3-204ENST00000418628 PECRQ9BY49 303 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms