RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	MRPS24	Q96EL2	167 aa	Known RBP	13.27	□□□□□ -0.29
DDR1-231	ENST00000417521		Q96M66	194 aa		13.27	□□□□□ -0.29
DDR1-231	ENST00000417521	TMEM59	Q9BXS4	323 aa		13.27	□□□□□ -0.29
DDR1-231	ENST00000417521	PPA2	Q9H2U2	334 aa		13.27	□□□□□ -0.29
DDR1-231	ENST00000417521	GAL3ST2	Q9H3Q3	398 aa		13.27	□□□□□ -0.29
DDR1-231	ENST00000417521	TAS2R3	Q9NYW6	316 aa		13.27	□□□□□ -0.29
DDR1-231	ENST00000417521	CEPT1	Q9Y6K0	416 aa		13.27	□□□□□ -0.29
DDR1-231	ENST00000417521	TRAV24	A0A0B4J272	114 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	TMEM272	A0A1B0GTI8	110 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	HSPB6	O14558	160 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	CLPX	O76031	633 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	SNRPB	P14678	240 aa	Known RBP	13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	GLIPR1	P48060	266 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	TMBIM6	P55061	237 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	OR2W3	Q7Z3T1	314 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	PIFO	Q8TCI5	191 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	RAB2B	Q8WUD1	216 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	ISOC1	Q96CN7	298 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	CYYR1	Q96J86	154 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	NICN1	Q9BSH3	213 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	DCSTAMP	Q9H295	470 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	TMEM133	Q9H2Q1	129 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	RAB18	Q9NP72	206 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	TRRAP	Q9Y4A5	3859 aa		13.26	□□□□□ -0.29
DDR1-231	ENST00000417521	ODAM	A1E959	279 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	LDLRAD4	O15165	306 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	PAX6	P26367	422 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	EFNB2	P52799	333 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	PROK1	P58294	105 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	RPS27A	P62979	156 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	DYNC1I2	Q13409	638 aa	Known RBP	13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	SPCS2	Q15005	226 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	MPV17L	Q2QL34	196 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	KRBOX4	Q5JUW0	171 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	MINOS1	Q5TGZ0	78 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	OR52W1	Q6IF63	320 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	BRICD5	Q6PL45	260 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	HEPN1	Q6WQI6	88 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	LIAT1	Q6ZQX7	453 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	SLC25A46	Q96AG3	418 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	BARHL1	Q9BZE3	327 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	LPAR5	Q9H1C0	372 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	NCOR1P1	Q9H4R4	102 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	FBLN5	Q9UBX5	448 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521	MINOS1-NBL1	R4GNA1	71 aa		13.25	□□□□□ -0.29
DDR1-231	ENST00000417521		A0A0A6YYD4	124 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	IGHV2-26	A0A0B4J1V2	119 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521		H3BMQ9	156 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	LY6E	Q16553	131 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	PAN3	Q58A45	887 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	ATAD3C	Q5T2N8	411 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	SIGIRR	Q6IA17	410 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	SLC35E4	Q6ICL7	350 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	LINC00596	Q86U02	117 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	DYNAP	Q8N1N2	210 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	SUMF2	Q8NBJ7	301 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	COQ2	Q96H96	371 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	CITED1	Q99966	193 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	CLEC7A	Q9BXN2	247 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	RBM38	Q9H0Z9	239 aa	Known RBP	13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	IFT22	Q9H7X7	185 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	OR6C3	Q9NZP0	311 aa		13.24	□□□□□ -0.29
DDR1-231	ENST00000417521	NOL3	O60936	208 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	MMP23A	O75900	390 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	CDK2	P24941	298 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	KCNJ3	P48549	501 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	ATXN7L3	Q14CW9	347 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	SSX2	Q16385	188 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	LDLRAD2	Q5SZI1	272 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	RTN4RL2	Q86UN3	420 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	DTX3	Q8N9I9	347 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	OR5H6	Q8NGV6	325 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	LGALS14	Q8TCE9	139 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	DPCD	Q9BVM2	203 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	TM2D1	Q9BX74	207 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	ING3	Q9NXR8	418 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A10P	A6NDY2	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A18P	A6NE21	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A16P	A6NEW6	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	CCDC160	A6NGH7	325 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A20P	A6NIJ5	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A7P	A6NKC0	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	ZNF729	A6NN14	1252 aa	Predicted RBP	13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A22P	A8MWA6	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A12P	A8MX19	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A5P	A8MXJ8	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A23P	A8MXZ1	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A15P	P0C7V4	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A13P	P0C7W8	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A14P	P0C7W9	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM90A24P	P0C7X0	464 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	RANBP1	P43487	201 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	KIR2DS4	P43632	304 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	DYNLT3	P51808	116 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	PAX5	Q02548	391 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	SRSF4	Q08170	494 aa	Known RBP	13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	FAM189A2	Q15884	450 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	CROCCP3	Q8IVE0	287 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	ABHD12	Q8N2K0	398 aa		13.23	□□□□□ -0.29
DDR1-231	ENST00000417521	ZNF565	Q8N9K5	539 aa		13.23	□□□□□ -0.29

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