RNA–Protein interactions for RNA: ENST00000417137.5

SMARCB1-205, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1, humanhuman

TSL 3

Gene SMARCB1, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCB1-205ENST00000417137 C6orf183Q5T699 404 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 TRAT1Q6PIZ9 186 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 Q6ZTK2 550 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 C6orf201Q7Z4U5 140 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 CROCCP3Q8IVE0 287 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 GAPTQ8N292 157 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 ABHD12Q8N2K0 398 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 SULT4A1Q9BR01 284 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 IDI2-AS1Q9NZ38 188 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 COL6A5A8TX70 2615 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 MXRA5Q9NR99 2828 aa18.81■□□□□ 0.6
SMARCB1-205ENST00000417137 A0A0A6YYD4 124 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 IGHV2-26A0A0B4J1V2 119 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 TRAV39A0A0B4J263 110 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 MDFIC2A0A1B0GVS7 189 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 NPIPB11E5RHQ5 1161 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 CLEC2LP0C7M8 214 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 ZNF626Q68DY1 528 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 ZDHHC22Q8N966 263 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 OR4K15Q8NH41 348 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 ARL11Q969Q4 196 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 RIMS4Q9H426 269 aaPredicted RBP18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 KCNIP1Q9NZI2 227 aa18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 TBL2Q9Y4P3 447 aaKnown RBP18.8■□□□□ 0.6
SMARCB1-205ENST00000417137 CLDN34H7C241 214 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 NFYBP25208 207 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 PRRX1P54821 245 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 SLC16A12Q6ZSM3 486 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 GPR141Q7Z602 305 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 LDLRAD3Q86YD5 345 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 TMEM86BQ8N661 226 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 RFESDQ8TAC1 157 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 ZNF596Q8TC21 504 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 SSMEM1Q8WWF3 244 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 DYRK2Q92630 601 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 KIRREL1Q96J84 757 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 DPAGT1Q9H3H5 408 aa18.79■□□□□ 0.6
SMARCB1-205ENST00000417137 A0A0B4J203 849 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 DNAJC9-AS1A6NH13 148 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 ODF3BA8MYP8 253 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 TOR1AO14656 332 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 SPINT2O43291 252 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 MELTFP08582 738 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 CD34P28906 385 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 SCAND1P57086 179 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 IDNKQ5T6J7 187 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 MALSU1Q96EH3 234 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 CHMP1AQ9HD42 196 aaPredicted RBP18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 ESM1Q9NQ30 184 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 POMT1Q9Y6A1 747 aa18.78■□□□□ 0.6
SMARCB1-205ENST00000417137 ATRQ13535 2644 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 A0A087X0M5 115 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 A0A1B0GX30 115 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 HOXA3O43365 443 aaPredicted RBP18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 TFAP2AP05549 437 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 SSTR5P35346 364 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 GDNFP39905 211 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 ALDH3B2P48448 385 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 EFNB2P52799 333 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 TMEM50BP56557 158 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 UBA52P62987 128 aaKnown RBP18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 SRSF2Q01130 221 aaKnown RBP18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 SLC9A3R2Q15599 337 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 MINOS1Q5TGZ0 78 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 ZNF554Q86TJ5 538 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 ANKRD13BQ86YJ7 626 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 BEND2Q8NDZ0 799 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 OR10R2Q8NGX6 335 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 CREB3L1Q96BA8 519 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 RAB3CQ96E17 227 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 ARHGAP5-AS1Q96IT6 56 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 PECRQ9BY49 303 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 ATG5Q9H1Y0 275 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 MINOS1-NBL1R4GNA1 71 aa18.77■□□□□ 0.6
SMARCB1-205ENST00000417137 DSCAML1Q8TD84 2053 aa18.77■□□□□ 0.59
SMARCB1-205ENST00000417137 BTBD17A6NE02 478 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 FOXI3A8MTJ6 420 aaPredicted RBP18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 RNF212BA8MTL3 300 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 C15orf65H3BRN8 121 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 SCGNO76038 276 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 SNRPBP14678 240 aaKnown RBP18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 RPS19P39019 145 aaKnown RBP18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 PLA2G7Q13093 441 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 ARL6IP1Q15041 203 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 LTC4SQ16873 150 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 TMEM30BQ3MIR4 351 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 OR52M1Q8NGK5 317 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 OR9G1Q8NH87 305 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 MRPL30Q8TCC3 161 aaKnown RBP18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 FAM216AQ8WUB2 273 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 MEGF9Q9H1U4 602 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 MBNL3Q9NUK0 354 aaKnown RBP18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 ZNRD1Q9P1U0 126 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 ETV7Q9Y603 341 aa18.76■□□□□ 0.59
SMARCB1-205ENST00000417137 POM121CA8CG34 1229 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 RCC1P18754 421 aaPredicted RBP18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 HTR1DP28221 377 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 TGFBR1P36897 503 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 IER3P46695 156 aa18.75■□□□□ 0.59
SMARCB1-205ENST00000417137 MRPS15P82914 257 aaKnown RBP18.75■□□□□ 0.59
Retrieved 100 of 20,778 RNA–protein pairs in 93.7 ms