RNA–Protein interactions for RNA: ENST00000414981.2

HMGB3P23-201, Transcript of high mobility group box 3 pseudogene 23, humanhuman

BASIC

Gene HMGB3P23, Length 585 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P23-201ENST00000414981 TNFAIP8L1Q8WVP5 186 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 TCTEX1D2Q8WW35 142 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 C22orf15Q8WYQ4 148 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 MRPS31Q92665 395 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 CDS1Q92903 461 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 MAP3K3Q99759 626 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 RAB11FIP5Q9BXF6 653 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 PLA2G12AQ9BZM1 189 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 SYT4Q9H2B2 425 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 RERGLQ9H628 205 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ISG20L2Q9H9L3 353 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ADGRL4Q9HBW9 690 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 SHPKQ9UHJ6 478 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 SMPXQ9UHP9 88 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF223Q9UK11 482 aaPredicted RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 MRTO4Q9UKD2 239 aaKnown RBP2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 MOKQ9UQ07 419 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC22A7Q9Y694 548 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 COLEC10Q9Y6Z7 277 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 COL4A6Q14031 1691 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 BRWD3Q6RI45 1802 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 SCN10AQ9Y5Y9 1956 aa2.98□□□□□ -1.93
HMGB3P23-201ENST00000414981 NUP214P35658 2090 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PLXNA4Q9HCM2 1894 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 KIF26AQ9ULI4 1882 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TRAV18A0A075B6X5 111 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 FXYD6-FXYD2A0A087WZ82 144 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TRBV5-5A0A0J9YX44 114 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 A0A1W2PR80 420 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TVP23AA6NH52 213 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR5H14A6NHG9 310 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 NKX6-3A6NJ46 265 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 FAM74A7A6NL05 159 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM212A6NML5 194 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 C17orf105B2RV13 164 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 LMO7DNF2Z398 122 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 NPIPA3F8WFD2 350 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 J3QLW9 94 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 K7EN84 100 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 MFNGO00587 321 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TGOLN2O43493 480 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CDC40O60508 579 aaKnown RBP eCLIP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CEACAM4O75871 244 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 STK17BO94768 372 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TOXO94900 526 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 FARS2O95363 451 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 IFNA10P01566 189 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RLN2P04090 185 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CD74P04233 296 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 P04436 131 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 DBIP07108 87 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CTSLP07711 333 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR4Q2P0C623 313 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PET100P0DJ07 73 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CT45A8P0DMV1 189 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CT45A9P0DMV2 189 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF19P17023 458 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RCC1P18754 421 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RPS4Y1P22090 263 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CRABP1P29762 137 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CD52P31358 61 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PYCR1P32322 319 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PRSS3P35030 304 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 HTR5AP47898 357 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CX3CR1P49238 355 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RAB5CP51148 216 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CAV2P51636 162 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 AKR1D1P51857 326 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 EFNB2P52799 333 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC25A1P53007 311 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 H2BFSP57053 126 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR10A3P58181 314 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TAS2R31P59538 309 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TAS2R20P59543 309 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RPS15AP62244 130 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RPS11P62280 158 aaKnown RBP eCLIP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RANP62826 216 aaKnown RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 RBX1P62877 108 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF85Q03923 595 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 PEA15Q15121 130 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNHIT3Q15649 155 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 BSXQ3C1V8 233 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC25A35Q3KQZ1 300 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 LINC00303Q3SY05 128 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 Q499Y3 187 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 ACSF3Q4G176 576 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM52BQ4KMG9 183 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 FAM74A3Q4VXF1 159 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CT45A2Q5DJT8 189 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TCTEX1D4Q5JR98 221 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SOHLH1Q5JUK2 328 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM244Q5VVB8 128 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 ZNF776Q68DI1 518 aaPredicted RBP2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 CYB5R2Q6BCY4 276 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 OR4C11Q6IEV9 310 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 C22orf39Q6P5X5 142 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 ATRAIDQ6UW56 229 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 TMEM205Q6UW68 189 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 HIST2H3AQ71DI3 136 aa2.97□□□□□ -1.93
HMGB3P23-201ENST00000414981 SLC16A14Q7RTX9 510 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms