RNA–Protein interactions for RNA: ENST00000414632.5

VPS41-205, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 548 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-205ENST00000414632 IGKV1D-12P01611 117 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 ACAA1P09110 424 aaPredicted RBP3.99□□□□□ -1.77
VPS41-205ENST00000414632 PPIAL4GP0DN37 164 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 CELP19835 753 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PRKACBP22694 351 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 MPZP25189 248 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PRDX2P32119 198 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 MC5RP33032 325 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 CFHR2P36980 270 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 VHLP40337 213 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 MAP2K4P45985 399 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 NPY4RP50391 375 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 WNT4P56705 351 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 RPS11P62280 158 aaKnown RBP eCLIP3.99□□□□□ -1.77
VPS41-205ENST00000414632 COL10A1Q03692 680 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 SCN1BQ07699 218 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 IL24Q13007 206 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 MRPL28Q13084 256 aaKnown RBP3.99□□□□□ -1.77
VPS41-205ENST00000414632 MED21Q13503 144 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 EDDM3AQ14507 147 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PNLIPRP3Q17RR3 467 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 KIAA2026Q5HYC2 2103 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 METTL11BQ5VVY1 283 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 DMKNQ6E0U4 476 aaPredicted RBP3.99□□□□□ -1.77
VPS41-205ENST00000414632 UTS2BQ765I0 119 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 VMO1Q7Z5L0 202 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 SERPINA12Q8IW75 414 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PHC2Q8IXK0 858 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PNKDQ8N490 385 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 NANOGP1Q8N7R0 232 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 TPRX1Q8N7U7 411 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 ASCC1Q8N9N2 400 aaKnown RBP3.99□□□□□ -1.77
VPS41-205ENST00000414632 TEX45Q8NA69 505 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 ZNF485Q8NCK3 441 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 CCDC54Q8NEL0 328 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 OR52N1Q8NH53 320 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 GPR148Q8TDV2 347 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 TAF15Q92804 592 aaKnown RBP eCLIP3.99□□□□□ -1.77
VPS41-205ENST00000414632 TMEM106AQ96A25 262 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 C12orf43Q96C57 262 aaKnown RBP3.99□□□□□ -1.77
VPS41-205ENST00000414632 SMIM19Q96E16 107 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 MED30Q96HR3 178 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PGLYRP3Q96LB9 341 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 CEP19Q96LK0 163 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 ZNF48Q96MX3 618 aaPredicted RBP3.99□□□□□ -1.77
VPS41-205ENST00000414632 MYCBPQ99417 103 aaPredicted RBP3.99□□□□□ -1.77
VPS41-205ENST00000414632 GPER1Q99527 375 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 NRIP2Q9BQI9 281 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 DCTN5Q9BTE1 182 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 TMED9Q9BVK6 235 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 ANKRD60Q9BZ19 345 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PKIBQ9C010 78 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 CHST6Q9GZX3 395 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 SIRPDQ9H106 197 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 MMP27Q9H306 513 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 VCX3BQ9H321 246 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 HES4Q9HCC6 221 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 ESM1Q9NQ30 184 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 C19orf12Q9NSK7 152 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 PLCXD1Q9NUJ7 323 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 FKBP14Q9NWM8 211 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 SCN3BQ9NY72 215 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 RASL12Q9NYN1 266 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 CNOT2Q9NZN8 540 aaKnown RBP3.99□□□□□ -1.77
VPS41-205ENST00000414632 KAAG1Q9UBP8 84 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 NUP50Q9UKX7 468 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 GSTK1Q9Y2Q3 226 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 POLDIP2Q9Y2S7 368 aa3.99□□□□□ -1.77
VPS41-205ENST00000414632 CENPVL3A0A0U1RRI6 287 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 H0YJX3 145 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 NOS1APO75052 506 aaPredicted RBP3.98□□□□□ -1.77
VPS41-205ENST00000414632 NDUFB4O95168 129 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 CDRT1O95170 752 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 HAND1O96004 215 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 IGLV2-14P01704 120 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 MAS1P04201 325 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 CD2P06729 351 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 LIPFP07098 398 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 HSMCR30P0CW71 290 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 CCL3L1P16619 93 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 RAB3AP20336 220 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 GABRR1P24046 479 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 EEF1B2P24534 225 aaKnown RBP3.98□□□□□ -1.77
VPS41-205ENST00000414632 PAX6P26367 422 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 CHATP28329 748 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 OR3A4PP47883 348 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 EDDM3BP56851 147 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ZP1P60852 638 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ERVK11-1P61568 191 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 SLC35A2P78381 396 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 PDZK1IP1Q13113 114 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 RIPK1Q13546 671 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ZNF273Q14593 569 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 KISS1Q15726 138 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 KRTAP21-3Q3LHN1 58 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 Q499Y3 187 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 CCDC58Q4VC31 144 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 FAM27D1Q5T7N8 215 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 DDI2Q5TDH0 399 aa3.98□□□□□ -1.77
VPS41-205ENST00000414632 ASPHD1Q5U4P2 390 aa3.98□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms