RNA–Protein interactions for RNA: ENST00000412568.6

PTPRF-204, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 5

Gene PTPRF, Length 4,154 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-204ENST00000412568 ZP1P60852 638 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 FAM3AP98173 230 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 IGFBP7Q16270 282 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 GUK1Q16774 197 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 MIDNQ504T8 468 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 LAMTOR1Q6IAA8 161 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 OR5A2Q8NGI9 324 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 ADAMTS17Q8TE56 1095 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 ERGIC1Q969X5 290 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 MRPS24Q96EL2 167 aaKnown RBP9.67□□□□□ -0.86
PTPRF-204ENST00000412568 S1PR3Q99500 378 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 PRO1933Q9H354 126 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 PSENENQ9NZ42 101 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 FBXL17Q9UF56 701 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 PTPRQQ9UMZ3 2332 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 TMEM218A2RU14 115 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 NEURL1O76050 574 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 RCC1P18754 421 aaPredicted RBP9.67□□□□□ -0.86
PTPRF-204ENST00000412568 Q0VFX4 171 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 RIPPLY2Q5TAB7 128 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 UQCC3Q6UW78 93 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 Q8IYB0 196 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 C22orf15Q8WYQ4 148 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 GFI1Q99684 422 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 MRPL13Q9BYD1 178 aaKnown RBP9.67□□□□□ -0.86
PTPRF-204ENST00000412568 LIN7CQ9NUP9 197 aaKnown RBP9.67□□□□□ -0.86
PTPRF-204ENST00000412568 CACNG5Q9UF02 275 aa9.67□□□□□ -0.86
PTPRF-204ENST00000412568 TRGV10A0A0A0MS01 117 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 MDFIC2A0A1B0GVS7 189 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 CLEC18AA5D8T8 446 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 J3QT63 122 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 AQP7O14520 342 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 DFFBO76075 338 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 SCTP09683 121 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 FOSL1P15407 271 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 KCNJ3P48549 501 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 RPP30P78346 268 aaKnown RBP9.66□□□□□ -0.86
PTPRF-204ENST00000412568 TMEM267Q0VDI3 215 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-204ENST00000412568 C9orf152Q5JTZ5 239 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 TBC1D26Q86UD7 250 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 CLEC18CQ8NCF0 446 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 RND1Q92730 232 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 GLRX2Q9NS18 164 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 GBF1Q92538 1859 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 E9PQ18 207 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 CNIH1O95406 144 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 TNFRSF1AP19438 455 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 PSMB3P49720 205 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 TMEM33P57088 247 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 UNC119Q13432 240 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 HOGA1Q86XE5 327 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 LHX4Q969G2 390 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 PIK3IP1Q96FE7 263 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 CEP295Q9C0D2 2601 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 A0A1W2PPQ1 181 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 ABCD4O14678 606 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 HAND1O96004 215 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 CST4P01036 141 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 ARG1P05089 322 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 CTSDP07339 412 aaPredicted RBP9.66□□□□□ -0.86
PTPRF-204ENST00000412568 FAM87AP0C7U9 286 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 METTL15P1P0C7V9 234 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 RAB4AP20338 218 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 LPAR6P43657 344 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 TNFSF10P50591 281 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 RBM11P57052 281 aaKnown RBP9.66□□□□□ -0.86
PTPRF-204ENST00000412568 TVP23CQ96ET8 276 aa9.66□□□□□ -0.86
PTPRF-204ENST00000412568 IGHMP01871 453 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 G0S2P27469 103 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 C2orf68Q2NKX9 166 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 BMPERQ8N8U9 685 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 FGFBP3Q8TAT2 258 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 EDARADDQ8WWZ3 215 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 AQP3Q92482 292 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 ADGRG7Q96K78 797 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 CXXC4Q9H2H0 198 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 LAMP3Q9UQV4 416 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 OR5H1A6NKK0 313 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 CDX4O14627 284 aaPredicted RBP9.65□□□□□ -0.86
PTPRF-204ENST00000412568 NMBP08949 121 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 INO80CQ6PI98 192 aaPredicted RBP9.65□□□□□ -0.86
PTPRF-204ENST00000412568 OR10S1Q8NGN2 331 aa9.65□□□□□ -0.86
PTPRF-204ENST00000412568 KIF26AQ9ULI4 1882 aaPredicted RBP9.65□□□□□ -0.86
PTPRF-204ENST00000412568 C5orf63A6NC05 138 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 DHRS7CA6NNS2 312 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 CDK2AP1O14519 115 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 GPR37O15354 613 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 F12P00748 615 aaPredicted RBP9.65□□□□□ -0.87
PTPRF-204ENST00000412568 FCGR3AP08637 254 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 OR8U8P0C7N1 319 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 FABP4P15090 132 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 GTF3C1Q12789 2109 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 NCMAPQ5T1S8 102 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 UBAC2Q8NBM4 344 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 C10orf35Q96D05 121 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 TMED3Q9Y3Q3 217 aa9.65□□□□□ -0.87
PTPRF-204ENST00000412568 A0A1B0GTI1 187 aa9.64□□□□□ -0.87
PTPRF-204ENST00000412568 C16orf97H3BN30 126 aa9.64□□□□□ -0.87
PTPRF-204ENST00000412568 CCL21O00585 134 aa9.64□□□□□ -0.87
PTPRF-204ENST00000412568 APOA2P02652 100 aa9.64□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms