RNA–Protein interactions for RNA: ENST00000412052.4

ATRIP-204, Transcript of ATR interacting protein, humanhuman

TSL 1 (best) BASIC

Gene ATRIP, Length 2,721 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATRIP-204ENST00000412052 TUBA4BQ9H853 241 aa12.15□□□□□ -0.46
ATRIP-204ENST00000412052 PLSCR2Q9NRY7 297 aa12.15□□□□□ -0.46
ATRIP-204ENST00000412052 PGLYRP1O75594 196 aaPredicted RBP12.15□□□□□ -0.47
ATRIP-204ENST00000412052 SMIM6P0DI80 62 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 PSG2P11465 335 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 CYB561P49447 251 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 HOXA4Q00056 320 aaPredicted RBP12.15□□□□□ -0.47
ATRIP-204ENST00000412052 TCEAL6Q6IPX3 200 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 FAM180AQ6UWF9 173 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 ZDHHC23Q8IYP9 409 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 TCEAL3Q969E4 200 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 MUCL1Q96DR8 90 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 METTL1Q9UBP6 276 aaKnown RBP12.15□□□□□ -0.47
ATRIP-204ENST00000412052 ZNF391Q9UJN7 358 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 RNF115Q9Y4L5 304 aa12.15□□□□□ -0.47
ATRIP-204ENST00000412052 DOCK11Q5JSL3 2073 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 TUSC2O75896 110 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 IAPPP10997 89 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 UCP1P25874 307 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 ID3Q02535 119 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 HEPN1Q6WQI6 88 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 MRPL30Q8TCC3 161 aaKnown RBP12.14□□□□□ -0.47
ATRIP-204ENST00000412052 Q8WTZ3 238 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 FAM86C1Q9NVL1 165 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 PLA2G3Q9NZ20 509 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 LRFN1Q9P244 771 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 MIOXQ9UGB7 285 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 USF3Q68DE3 2245 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 TGIF2-C20orf24A0A0A6YYL0 155 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 TRAV20A0A0B4J274 112 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 TRAPPC2LH3BP13 241 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 S100A9P06702 114 aaKnown RBP12.14□□□□□ -0.47
ATRIP-204ENST00000412052 VDAC1P21796 283 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 TAGLN2P37802 199 aaKnown RBP12.14□□□□□ -0.47
ATRIP-204ENST00000412052 ERVFRD-1P60508 538 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 HIKESHIQ53FT3 197 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 WDR5BQ86VZ2 330 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 THNSL2Q86YJ6 484 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 GPR146Q96CH1 333 aa12.14□□□□□ -0.47
ATRIP-204ENST00000412052 TRAV24A0A0B4J272 114 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 IFITM10A6NMD0 228 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 PPIHO43447 177 aaKnown RBP12.13□□□□□ -0.47
ATRIP-204ENST00000412052 SCAF4O95104 1147 aaKnown RBP12.13□□□□□ -0.47
ATRIP-204ENST00000412052 FGF8P55075 233 aaPredicted RBP12.13□□□□□ -0.47
ATRIP-204ENST00000412052 DLK1P80370 383 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 SSX7Q7RTT5 188 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 LFNGQ8NES3 379 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 OR1K1Q8NGR3 316 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 EDARADDQ8WWZ3 215 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 THOC3Q96J01 351 aaKnown RBP12.13□□□□□ -0.47
ATRIP-204ENST00000412052 ERRFI1Q9UJM3 462 aaPredicted RBP12.13□□□□□ -0.47
ATRIP-204ENST00000412052 AP4M1O00189 453 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 MAGEA5P43359 124 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 UBE2KP61086 200 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 SRPXP78539 464 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 ARL16Q0P5N6 197 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 CEACAM21Q3KPI0 293 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 FAM185AQ8N0U4 392 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 Q8NFD4 153 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 SPIN2AQ99865 258 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 SPIN2BQ9BPZ2 258 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 ZNF251Q9BRH9 671 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 ATP23Q9Y6H3 246 aa12.13□□□□□ -0.47
ATRIP-204ENST00000412052 SLC34A2O95436 690 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 S100A8P05109 93 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 SELEP16581 610 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 LHX2P50458 406 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 AKR1C8PQ5T2L2 129 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 FAM53AQ6NSI3 398 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-204ENST00000412052 ZNF429Q86V71 674 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 CMTM1Q8IZ96 169 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 SLC25A31Q9H0C2 315 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 WSB1Q9Y6I7 421 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 IGKV1-39P01597 117 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 IGKV1D-39P04432 117 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 RAB1AP62820 205 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 KIAA0141Q14154 515 aaPredicted RBP12.12□□□□□ -0.47
ATRIP-204ENST00000412052 MPV17LQ2QL34 196 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 CLDND2Q8NHS1 167 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 KIAA1456Q9P272 454 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 GNG13Q9P2W3 67 aa12.12□□□□□ -0.47
ATRIP-204ENST00000412052 CD300LBA8K4G0 201 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 NEURL1O76050 574 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 F2RP25116 425 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 WNT5AP41221 380 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 CLDN18P56856 261 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 S100A12P80511 92 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 PDZD11Q5EBL8 140 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 GFI1BQ5VTD9 330 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 SP5Q6BEB4 398 aaPredicted RBP12.11□□□□□ -0.47
ATRIP-204ENST00000412052 OR2T2Q6IF00 324 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 NUFIP2Q7Z417 695 aaKnown RBP12.11□□□□□ -0.47
ATRIP-204ENST00000412052 MKXQ8IYA7 352 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 KDF1Q8NAX2 398 aaPredicted RBP12.11□□□□□ -0.47
ATRIP-204ENST00000412052 BCL2L14Q9BZR8 327 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 C12orf49Q9H741 205 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 ZNF665Q9H7R5 613 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 PPP1R3CQ9UQK1 317 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 BOD1L1Q8NFC6 3051 aa12.11□□□□□ -0.47
ATRIP-204ENST00000412052 ZFP92A6NM28 416 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms