RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 RHOVQ96L33 236 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 NSMCE2Q96MF7 247 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 MBOAT4Q96T53 435 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 NEURL2Q9BR09 285 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF251Q9BRH9 671 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 THAP7Q9BT49 309 aaPredicted RBP1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 TEX12Q9BXU0 123 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 DGCR6LQ9BY27 220 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 ANKRD60Q9BZ19 345 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 COMMD4Q9H0A8 199 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 CST11Q9H112 138 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 PPIL3Q9H2H8 161 aaKnown RBP1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 SLA2Q9H6Q3 261 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 SRD5A3Q9H8P0 318 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 REEP1Q9H902 201 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 PLEKHA3Q9HB20 300 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 RHOFQ9HBH0 211 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 SPAG4Q9NPE6 437 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 PARP11Q9NR21 331 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 FAM118AQ9NWS6 357 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 CNOT2Q9NZN8 540 aaKnown RBP1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 ABCD2Q9UBJ2 740 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 KIF25Q9UIL4 384 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 MAGEL2Q9UJ55 1249 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR52A1Q9UKL2 312 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 RAB21Q9UL25 225 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 FOXA2Q9Y261 457 aaPredicted RBP1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 SNX5Q9Y5X3 404 aa1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 V9GYY5 206 aaPredicted RBP1.8□□□□□ -2.12
RNU4-53P-201ENST00000410828 DSCAML1Q8TD84 2053 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 FRAS1Q86XX4 4008 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TRAV39A0A0B4J263 110 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TRAV24A0A0B4J272 114 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 IGKV1-9A0A0C4DH69 117 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 A0A0J9YWU9 116 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 C13orf42A0A1B0GVH6 325 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 PRR32B1ATL7 298 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR11H12B2RN74 326 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF670-ZNF695F2Z2N8 137 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SDCBPO00560 298 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 NBR2O15453 112 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 MAGEB4O15481 346 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 LANCL1O43813 399 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ORC5O43913 435 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SOX15O60248 233 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CCDC22O60826 627 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SRSF10O75494 262 aaKnown RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 RPP14O95059 124 aaKnown RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 NDUFA3O95167 84 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TRGV3P03979 118 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TFAP2AP05549 437 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 KRT8P05787 483 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CSN3P07498 182 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CD7P09564 240 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TMEM225BP0DP42 221 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 COX4I1P13073 169 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF20P17024 532 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ATF4P18848 351 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SLC2A5P22732 501 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 FASP25445 335 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 BMI1P35226 326 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 VHLP40337 213 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 MAGEA2P43356 314 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ZNF137PP52743 207 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CRIP2P52943 208 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SYNJ2BPP57105 145 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TCTAP57738 103 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TPPP2P59282 170 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CX3CL1P78423 397 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 PAX5Q02548 391 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TNFRSF9Q07011 255 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 PPP1R8Q12972 351 aaKnown RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 LSAMPQ13449 338 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 GK3PQ14409 553 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 GINS1Q14691 196 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CDK5R1Q15078 307 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 LRRC36Q1X8D7 754 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 MICAQ29983 383 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ODF4Q2M2E3 257 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 RPEL1Q2QD12 228 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 AKIRIN2Q53H80 203 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 ACTBL2Q562R1 376 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 C19orf54Q5BKX5 351 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 TMEM244Q5VVB8 128 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 RSBN1Q5VWQ0 802 aaPredicted RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 STEAP3Q658P3 488 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 OR2T5Q6IEZ7 315 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 CD200R1LQ6Q8B3 271 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 UNQ5815/PRO19632Q6UWF5 114 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 IL34Q6ZMJ4 242 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 PLEKHG7Q6ZR37 379 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SLC25A48Q6ZT89 311 aaKnown RBP1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 Q6ZWC4 215 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 UTS2BQ765I0 119 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SLC16A13Q7RTY0 426 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 HDXQ7Z353 690 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 LYG2Q86SG7 212 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 WFDC3Q8IUB2 231 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 SAXO1Q8IYX7 474 aa1.79□□□□□ -2.12
RNU4-53P-201ENST00000410828 LFNGQ8NES3 379 aa1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms