RNA–Protein interactions for RNA: ENST00000409783.6

PTCD3-203, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 587 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-203ENST00000409783 SLC9A3R2Q15599 337 aa18.17■□□□□ 0.5
PTCD3-203ENST00000409783 NKAPLQ5M9Q1 402 aa18.17■□□□□ 0.5
PTCD3-203ENST00000409783 KIRREL1Q96J84 757 aa18.17■□□□□ 0.5
PTCD3-203ENST00000409783 NEDD4LQ96PU5 975 aa18.17■□□□□ 0.5
PTCD3-203ENST00000409783 FAAP24Q9BTP7 215 aa18.17■□□□□ 0.5
PTCD3-203ENST00000409783 FUNDC2Q9BWH2 189 aa18.17■□□□□ 0.5
PTCD3-203ENST00000409783 MRPS26Q9BYN8 205 aaKnown RBP18.17■□□□□ 0.5
PTCD3-203ENST00000409783 RAB22AQ9UL26 194 aa18.17■□□□□ 0.5
PTCD3-203ENST00000409783 A0A087X0M5 115 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 A0A1B0GX30 115 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 C15orf65H3BRN8 121 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 CLDN34H7C241 214 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 HOXA3O43365 443 aaPredicted RBP18.16■□□□□ 0.5
PTCD3-203ENST00000409783 CD34P28906 385 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 MXD1Q05195 221 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 OR52W1Q6IF63 320 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 SFXN4Q6P4A7 337 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 LHFPL4Q7Z7J7 247 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 OR4K15Q8NH41 348 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 CCDC107Q8WV48 283 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 ZFAND2BQ8WV99 257 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 ZDHHC16Q969W1 377 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 DUX5Q96PT3 197 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 ZNRD1Q9P1U0 126 aa18.16■□□□□ 0.5
PTCD3-203ENST00000409783 TFAP2AP05549 437 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 FBP1P09467 338 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 RAB6AP20340 208 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 GZMHP20718 246 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 ALDH3B2P48448 385 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 VEGFCP49767 419 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 RFESDQ8TAC1 157 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 MRPL30Q8TCC3 161 aaKnown RBP18.15■□□□□ 0.5
PTCD3-203ENST00000409783 PTX4Q96A99 478 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 CLEC7AQ9BXN2 247 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 ZNF286AQ9HBT8 521 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 IDI2-AS1Q9NZ38 188 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 DAPK2Q9UIK4 370 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 HSF4Q9ULV5 492 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 FAM96BQ9Y3D0 163 aa18.15■□□□□ 0.5
PTCD3-203ENST00000409783 TRIM77I1YAP6 450 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 ORC5O43913 435 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 ARG1P05089 322 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 RCC1P18754 421 aaPredicted RBP18.14■□□□□ 0.49
PTCD3-203ENST00000409783 IER3P46695 156 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 LSM3P62310 102 aaKnown RBP18.14■□□□□ 0.49
PTCD3-203ENST00000409783 PLAC9Q5JTB6 97 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 Q6ZPA2 131 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 SLC16A12Q6ZSM3 486 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 DYNAPQ8N1N2 210 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 ABHD12Q8N2K0 398 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 BEND2Q8NDZ0 799 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 OR10A7Q8NGE5 316 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 TMEM158Q8WZ71 300 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 MEGF9Q9H1U4 602 aa18.14■□□□□ 0.49
PTCD3-203ENST00000409783 MBNL3Q9NUK0 354 aaKnown RBP18.14■□□□□ 0.49
PTCD3-203ENST00000409783 TBL2Q9Y4P3 447 aaKnown RBP18.14■□□□□ 0.49
PTCD3-203ENST00000409783 FAM172BPA6NC97 362 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 C12orf77C9JDV5 145 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 NAPSAO96009 420 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 IGLV1-47P01700 117 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 IGHV4-59P01825 116 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 RNASE1P07998 156 aaKnown RBP18.13■□□□□ 0.49
PTCD3-203ENST00000409783 PAX6P26367 422 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 MOGAT2Q3SYC2 334 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP18.13■□□□□ 0.49
PTCD3-203ENST00000409783 OR56B1Q8NGI3 324 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 OR4P4Q8NGL7 312 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 FAM216AQ8WUB2 273 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 ARHGAP5-AS1Q96IT6 56 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 PECRQ9BY49 303 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 ZMAT3Q9HA38 289 aaKnown RBP18.13■□□□□ 0.49
PTCD3-203ENST00000409783 PLEKHJ1Q9NW61 149 aa18.13■□□□□ 0.49
PTCD3-203ENST00000409783 RNF212BA8MTL3 300 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 RAB27BO00194 218 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 SNRPBP14678 240 aaKnown RBP18.12■□□□□ 0.49
PTCD3-203ENST00000409783 LGALS4P56470 323 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 TMEM86BQ8N661 226 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 UBALD1Q8TB05 177 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 SSMEM1Q8WWF3 244 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 ARL11Q969Q4 196 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 NAA50Q9GZZ1 169 aaKnown RBP18.12■□□□□ 0.49
PTCD3-203ENST00000409783 TRAPPC2LQ9UL33 140 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 KCNK7Q9Y2U2 307 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 POMT1Q9Y6A1 747 aa18.12■□□□□ 0.49
PTCD3-203ENST00000409783 F2RL2O00254 374 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 PAHP00439 452 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 NFYBP25208 207 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 RPS19P39019 145 aaKnown RBP18.11■□□□□ 0.49
PTCD3-203ENST00000409783 LOXL3P58215 753 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 DYNC1I2Q13409 638 aaKnown RBP18.11■□□□□ 0.49
PTCD3-203ENST00000409783 ZNF880Q6PDB4 577 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 Q6ZTK2 550 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 C5orf24Q7Z6I8 188 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 C19orf24Q9BVV8 132 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 AK3Q9UIJ7 227 aa18.11■□□□□ 0.49
PTCD3-203ENST00000409783 NCS1P62166 190 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 LTC4SQ16873 150 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 C6orf183Q5T699 404 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 MINOS1Q5TGZ0 78 aa18.1■□□□□ 0.49
PTCD3-203ENST00000409783 OLFML2AQ68BL7 652 aa18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms