RNA–Protein interactions for RNA: ENST00000409747.5

CBX3-203, Transcript of chromobox 3, humanhuman

TSL 1 (best) BASIC

Gene CBX3, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-203ENST00000409747 GEMIN2O14893 280 aaKnown RBP11.71□□□□□ -0.54
CBX3-203ENST00000409747 GTF2F2P13984 249 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 TTC23Q5W5X9 447 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 STX19Q8N4C7 294 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 C5orf56Q8N8D9 126 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 OR51D1Q8NGF3 324 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 OR52M1Q8NGK5 317 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 NEK7Q8TDX7 302 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 CHPT1Q8WUD6 406 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 ZNF184Q99676 751 aaPredicted RBP11.71□□□□□ -0.54
CBX3-203ENST00000409747 GPR61Q9BZJ8 451 aa11.71□□□□□ -0.54
CBX3-203ENST00000409747 IGKV1D-33P01593 117 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 IGKV1-33P01594 117 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 GAPDHP04406 335 aaKnown RBP11.7□□□□□ -0.54
CBX3-203ENST00000409747 IL3RAP26951 378 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 ZNF816Q0VGE8 651 aaPredicted RBP11.7□□□□□ -0.54
CBX3-203ENST00000409747 Q499Y3 187 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 SLC22A6Q4U2R8 563 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 ATAD3CQ5T2N8 411 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 C8orf31Q8N9H6 132 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 GHSRQ92847 366 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 TMEM80Q96HE8 168 aa11.7□□□□□ -0.54
CBX3-203ENST00000409747 TRBV5-5A0A0J9YX44 114 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 CCRL2O00421 344 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 SDCBPO00560 298 aaPredicted RBP11.69□□□□□ -0.54
CBX3-203ENST00000409747 ORC5O43913 435 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 GPX5O75715 221 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 IGFBP3P17936 291 aaPredicted RBP11.69□□□□□ -0.54
CBX3-203ENST00000409747 FSTP19883 344 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 SLC6A1P30531 599 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 TAS2R43P59537 309 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 SLC35B1P78383 322 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 TMEM30BQ3MIR4 351 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 C10orf99Q6UWK7 81 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 FOXRED2Q8IWF2 684 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 COMMD1Q8N668 190 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 CYGBQ8WWM9 190 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 ARL11Q969Q4 196 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 MRPS24Q96EL2 167 aaKnown RBP11.69□□□□□ -0.54
CBX3-203ENST00000409747 SIRT4Q9Y6E7 314 aaPredicted RBP11.69□□□□□ -0.54
CBX3-203ENST00000409747 TRAV39A0A0B4J263 110 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 SERPINE3A8MV23 424 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 AIPO00170 330 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 DIAPH2-AS1Q14236 149 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 Q3ZCU0 254 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 DMKNQ6E0U4 476 aaPredicted RBP11.69□□□□□ -0.54
CBX3-203ENST00000409747 ZNF497Q6ZNH5 498 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 IZUMO1Q8IYV9 350 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 LINC00311Q8N616 119 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 PACRGLQ8N7B6 248 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
CBX3-203ENST00000409747 IGHV1-3A0A0C4DH29 117 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 C15orf65H3BRN8 121 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 EBI3Q14213 229 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 HNF4GQ14541 408 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 SLC35E3Q7Z769 313 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 MOB3BQ86TA1 216 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 THRSPQ92748 146 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 DPF1Q92782 380 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 GFOD1Q9NXC2 390 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 ZNF581Q9P0T4 197 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 CLEC2DQ9UHP7 191 aa11.68□□□□□ -0.54
CBX3-203ENST00000409747 A0A1W2PPE3 182 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 MCRIP1C9JLW8 97 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 SPINT2O43291 252 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 TXNL1O43396 289 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 LALBAP00709 142 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 IGHG2P01859 326 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 RPL23AP62750 156 aaKnown RBP11.67□□□□□ -0.54
CBX3-203ENST00000409747 C6orf183Q5T699 404 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 ZNF329Q86UD4 541 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 TGIF2LXQ8IUE1 241 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 CDH26Q8IXH8 852 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 JAGN1Q8N5M9 183 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 OR2T10Q8NGZ9 312 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 ORAI1Q96D31 301 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 PGLYRP3Q96LB9 341 aa11.67□□□□□ -0.54
CBX3-203ENST00000409747 RCC2Q9P258 522 aaKnown RBP11.67□□□□□ -0.54
CBX3-203ENST00000409747 MRPS28Q9Y2Q9 187 aaKnown RBP11.67□□□□□ -0.54
CBX3-203ENST00000409747 EFCAB10A6NFE3 127 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 MT-ND4P03905 459 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 RPS11P62280 158 aaKnown RBP eCLIP11.66□□□□□ -0.54
CBX3-203ENST00000409747 AWAT2Q6E213 333 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 TRAT1Q6PIZ9 186 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 DHRSXQ8N5I4 330 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 LINC00482Q8N8I6 264 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 CCDC107Q8WV48 283 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 MUL1Q969V5 352 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 GON7Q9BXV9 100 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 LIN7CQ9NUP9 197 aaKnown RBP11.66□□□□□ -0.54
CBX3-203ENST00000409747 CNOT2Q9NZN8 540 aaKnown RBP11.66□□□□□ -0.54
CBX3-203ENST00000409747 TRAPPC2LQ9UL33 140 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 TRAV8-7A0A075B6U6 113 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 TRBV5-7A0A0A0MS05 114 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 A0A1W2PP11 408 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 MAGEA13PA6NCF6 341 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 FAM90A10PA6NDY2 464 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 FAM90A7PA6NKC0 464 aa11.66□□□□□ -0.54
CBX3-203ENST00000409747 NCBP2LA6PVI3 153 aaKnown RBP11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms