RNA–Protein interactions for RNA: ENST00000409403.6

CLK1-202, Transcript of CDC like kinase 1, humanhuman

TSL 5

Gene CLK1, Length 1,664 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-202ENST00000409403 Q9N2K0 584 aa4.7□□□□□ -1.66
CLK1-202ENST00000409403 CHRNA9Q9UGM1 479 aa4.7□□□□□ -1.66
CLK1-202ENST00000409403 IL36AQ9UHA7 158 aa4.7□□□□□ -1.66
CLK1-202ENST00000409403 GPR132Q9UNW8 380 aa4.7□□□□□ -1.66
CLK1-202ENST00000409403 C14orf166Q9Y224 244 aaKnown RBP4.7□□□□□ -1.66
CLK1-202ENST00000409403 WDR45Q9Y484 360 aa4.7□□□□□ -1.66
CLK1-202ENST00000409403 NUP210Q8TEM1 1887 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 TRAV8-7A0A075B6U6 113 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 TRAV27A0A087WT01 109 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 KIR2DS5A0A0G2JLQ3 304 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 A0A1B0GU03 582 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ARL5CA6NH57 179 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 A6NNC1 897 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 FAM166BA8MTA8 275 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 A8MVM7 634 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ZNF705FA8MVS1 300 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 K7ERU9 68 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 KIR2DS3K7RE56 304 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ZNF264O43296 627 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 WDR1O75083 606 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 UPK3AO75631 287 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 C1orf105O95561 183 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 TBX6O95947 436 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 IFNA1P01562 189 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 THY1P04216 161 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 GYPBP06028 91 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 OR4A8P0C604 315 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ZNF705DP0CH99 300 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 ZNF705BP0CI00 300 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 PGA3P0DJD8 388 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 MSR1P21757 451 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 HRH1P35367 487 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 SSR2P43308 183 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 CSNK1A1P48729 337 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 PRLHRP49683 370 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ZNF136P52737 540 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 CLDN6P56747 220 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 TMPRSS3P57727 454 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 TAS2R46P59540 309 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 NANOS3P60323 173 aaKnown RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 PRPS1P60891 318 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 SNRPD1P62314 119 aaKnown RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 RPS24P62847 133 aaKnown RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 POLR2LP62875 67 aaKnown RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 PAFAH1B2P68402 229 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 IL24Q13007 206 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 TSTA3Q13630 321 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 IAH1Q2TAA2 248 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 ARHGAP11BQ3KRB8 267 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ZNF260Q3ZCT1 412 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 AADACL3Q5VUY0 350 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 PMS2CLQ68D20 193 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 KLHL24Q6TFL4 600 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ZNF793Q6ZN11 406 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ZNF836Q6ZNA1 936 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 TEX43Q6ZNM6 134 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 LINC01551Q86U37 167 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 RFLNBQ8N5W9 214 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 APCDD1LQ8NCL9 501 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ADAD2Q8NCV1 583 aaKnown RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 OR4C5Q8NGB2 326 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 PFN4Q8NHR9 129 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 MARCH1Q8TCQ1 289 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 WIPF2Q8TF74 440 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 IGFBPL1Q8WX77 278 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 DNASE2BQ8WZ79 361 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 HAS2Q92819 552 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 KLK6Q92876 244 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 C4orf45Q96LM5 186 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 P2RX4Q99571 388 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 PYGO2Q9BRQ0 406 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 VAMP8Q9BV40 100 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 TTTY10Q9BZA0 68 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 RBKSQ9H477 322 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 AAMDCQ9H7C9 122 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 MKKSQ9NPJ1 570 aaPredicted RBP4.69□□□□□ -1.66
CLK1-202ENST00000409403 GSKIPQ9P0R6 139 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 PADI1Q9ULC6 663 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 ANAPC10Q9UM13 185 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 APCP25054 2843 aa4.69□□□□□ -1.66
CLK1-202ENST00000409403 NUP210LQ5VU65 1888 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 PLXND1Q9Y4D7 1925 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 CSMD2Q7Z408 3487 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 MAP1LC3B2A6NCE7 125 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 ZNF860A6NHJ4 632 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 CBY3A6NI87 242 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 GPR89AB7ZAQ6 455 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 TMEM238C9JI98 176 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 H0YL77 283 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 KCNAB3O43448 404 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 FCMRO60667 390 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 CD160O95971 181 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 TYMSP04818 313 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 GPR89BP0CG08 455 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 IRF1P10914 325 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 F3P13726 295 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 HIST1H1CP16403 213 aaKnown RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 CCKBRP32239 447 aa4.68□□□□□ -1.66
CLK1-202ENST00000409403 TSFMP43897 325 aaKnown RBP4.68□□□□□ -1.66
CLK1-202ENST00000409403 MTCP1P56278 107 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 126.6 ms