RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 Q9N2K0 584 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 TRAPPC2LQ9UL33 140 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 ACANP16112 2415 aa16.88■□□□□ 0.29
VSX1-203ENST00000409285 ORC5O43913 435 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 RBP4P02753 201 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 GZMHP20718 246 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 GZMKP49863 264 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 GUCA2AQ02747 115 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 SSBP1Q04837 148 aaKnown RBP16.87■□□□□ 0.29
VSX1-203ENST00000409285 MADCAM1Q13477 382 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 TRAPPC6BQ86SZ2 158 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 KIR3DL3Q8N743 410 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 LINC01356Q8N9X3 169 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 ING3Q9NXR8 418 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 SVEP1Q4LDE5 3571 aa16.87■□□□□ 0.29
VSX1-203ENST00000409285 TRAV20A0A0B4J274 112 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 KIR2DS1A0A191URI9 304 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 ZNF729A6NN14 1252 aaPredicted RBP16.86■□□□□ 0.29
VSX1-203ENST00000409285 PPIAL4GP0DN37 164 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 RCC1P18754 421 aaPredicted RBP16.86■□□□□ 0.29
VSX1-203ENST00000409285 ZNF273Q14593 569 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 HMGN3Q15651 99 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 FAM185AQ8N0U4 392 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 GDPD1Q8N9F7 314 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 FCAMRQ8WWV6 532 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 ZNF714Q96N38 554 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 GAL3ST2Q9H3Q3 398 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 RBMX2Q9Y388 322 aaKnown RBP16.86■□□□□ 0.29
VSX1-203ENST00000409285 TLN2Q9Y4G6 2542 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 A0A1W2PQ09 198 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 IGHV4-31P0DP07 118 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 NAT1P18440 290 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 GATA3P23771 443 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 GLP1RP43220 463 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 KIR2DS4P43632 304 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 DLX6P56179 175 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 ACTBP60709 375 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 ACTG1P63261 375 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 KIR2DS1Q14954 304 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 HOGA1Q86XE5 327 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 CIARTQ8N365 385 aaPredicted RBP16.86■□□□□ 0.29
VSX1-203ENST00000409285 MAPK1IP1LQ8NDC0 245 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 OR52I2Q8NH67 350 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 MRGPRDQ8TDS7 321 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 WDR12Q9GZL7 423 aaKnown RBP16.86■□□□□ 0.29
VSX1-203ENST00000409285 RAB9BQ9NP90 201 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 MTFP1Q9UDX5 166 aa16.86■□□□□ 0.29
VSX1-203ENST00000409285 ZNF107Q9UII5 783 aaPredicted RBP16.86■□□□□ 0.29
VSX1-203ENST00000409285 KBTBD11-OT1A0A1B0GTJ5 212 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 C12orf77C9JDV5 145 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 NPIPB11E5RHQ5 1161 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 C15orf65H3BRN8 121 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 M0R1W7 72 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 DIRAS3O95661 229 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 ZNF728P0DKX0 622 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 DGCR2P98153 550 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 C1orf122Q6ZSJ8 110 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 CCDC107Q8WV48 283 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 MSI2Q96DH6 328 aaKnown RBP16.85■□□□□ 0.29
VSX1-203ENST00000409285 MMP26Q9NRE1 261 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 CALYQ9NYX4 217 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 KCNIP1Q9NZI2 227 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 ZNF230Q9UIE0 474 aaPredicted RBP16.85■□□□□ 0.29
VSX1-203ENST00000409285 INSIG2Q9Y5U4 225 aa16.85■□□□□ 0.29
VSX1-203ENST00000409285 C17orf98A8MV24 154 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 CD40LGP29965 261 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 RCVRNP35243 200 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 DVL1P1P54792 670 aaPredicted RBP16.84■□□□□ 0.29
VSX1-203ENST00000409285 HLA-DRB3P79483 266 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 ZNF846Q147U1 533 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 C17orf58Q2M2W7 97 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 TMEM30BQ3MIR4 351 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 PYDC2Q56P42 97 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 BTNL3Q6UXE8 466 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 Q8N402 240 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 C11orf42Q8N5U0 333 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 OR10A7Q8NGE5 316 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 TMEM186Q96B77 213 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 TAF9BQ9HBM6 251 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 ZNF286AQ9HBT8 521 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 IFT46Q9NQC8 304 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 KPTNQ9Y664 436 aa16.84■□□□□ 0.29
VSX1-203ENST00000409285 TRDCB7Z8K6 153 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 SSTR5P35346 364 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 HEPN1Q6WQI6 88 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 GVQW1Q8N7I0 195 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 BEST4Q8NFU0 473 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 SNAPC3Q92966 411 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 TRIM63Q969Q1 353 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 SDHCQ99643 169 aaPredicted RBP16.83■□□□□ 0.28
VSX1-203ENST00000409285 LPAR2Q9HBW0 351 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 ANXA10Q9UJ72 324 aa16.83■□□□□ 0.28
VSX1-203ENST00000409285 TRAV39A0A0B4J263 110 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 F2RL2O00254 374 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 RBBP9O75884 186 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 CCL3L1P16619 93 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 PPP5CP53041 499 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 GLCCI1Q86VQ1 547 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 OR4A4PQ8NGN8 299 aa16.82■□□□□ 0.28
VSX1-203ENST00000409285 SETD6Q8TBK2 473 aa16.82■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms