RNA–Protein interactions for RNA: ENST00000405409.6

RBFOX2-205, Transcript of RNA binding fox-1 homolog 2, humanhuman

TSL 1 (best) BASIC

Gene RBFOX2, Length 6,932 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-205ENST00000405409 FZD5Q13467 585 aa6.96□□□□□ -1.29
RBFOX2-205ENST00000405409 KIRREL2Q6UWL6 708 aa6.96□□□□□ -1.29
RBFOX2-205ENST00000405409 OR10AG1Q8NH19 301 aa6.96□□□□□ -1.29
RBFOX2-205ENST00000405409 MRPL30Q8TCC3 161 aaKnown RBP6.96□□□□□ -1.29
RBFOX2-205ENST00000405409 METTL26Q96S19 204 aa6.96□□□□□ -1.29
RBFOX2-205ENST00000405409 GEMIN7Q9H840 131 aaKnown RBP6.96□□□□□ -1.29
RBFOX2-205ENST00000405409 IL36RNQ9UBH0 155 aa6.96□□□□□ -1.29
RBFOX2-205ENST00000405409 TMEM262E9PQX1 116 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 TNFSF15O95150 251 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 EPPINO95925 133 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 RCC1P18754 421 aaPredicted RBP6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 ZNF774Q6NX45 483 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 STXBP6Q8NFX7 210 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 OR2V2Q96R30 315 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 PCGF1Q9BSM1 259 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 ZNF665Q9H7R5 613 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 TMEM160Q9NX00 188 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 TARM1B6A8C7 271 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 H0YIG0 161 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 MOSPD3O75425 235 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 CYB5R3P00387 301 aaPredicted RBP6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 SNRPCP09234 159 aaKnown RBP6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 IBA57Q5T440 356 aaKnown RBP6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 OR11H7Q8NGC8 314 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 SHROOM3Q8TF72 1996 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 PITX3O75364 302 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 IGHV4-39P01824 125 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 CTAG1AP78358 180 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 EBLN2Q6P2I7 272 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 TEPPQ6URK8 271 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 TMUB1Q9BVT8 246 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 OR51B2Q9Y5P1 312 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 UPK1AO00322 258 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 NPFFO15130 113 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 SIGLEC5O15389 551 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 GALNSP34059 522 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 SIGLEC14Q08ET2 396 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 LRRC75BQ2VPJ9 315 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 UBALD2Q8IYN6 164 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 GAPTQ8N292 157 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 C9orf62Q8N4C0 152 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 OR8B2Q96RD0 313 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 SLIRPQ9GZT3 109 aaKnown RBP6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 CLN8Q9UBY8 286 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 RGPD3A6NKT7 1758 aaPredicted RBP6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 LTN1O94822 1766 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 RGPD4Q7Z3J3 1758 aa6.96□□□□□ -1.3
RBFOX2-205ENST00000405409 HLA-DRB1P01911 266 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TYMSP04818 313 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 HOXC4P09017 264 aaPredicted RBP6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 MRPS11P82912 194 aaKnown RBP6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 OR4D9Q8NGE8 314 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 OR51M1Q9H341 326 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 MTCH2Q9Y6C9 303 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TRAV8-2A0A0B4J237 113 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 CTSDP07339 412 aaPredicted RBP6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 ERGP11308 486 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 FMODQ06828 376 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 ZNF770Q6IQ21 691 aaPredicted RBP6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TCTN3Q6NUS6 607 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 ST6GALNAC3Q8NDV1 305 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 OR4D5Q8NGN0 318 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 C4orf45Q96LM5 186 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 NTMQ9P121 344 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 KCNK7Q9Y2U2 307 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 DLG5Q8TDM6 1919 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TRGV5A0A0B4J1U4 118 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 A1L4Q6 167 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 LOXL3P58215 753 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TM4SF20Q53R12 229 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 PWWP2BQ6NUJ5 590 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 VSTM2AQ8TAG5 236 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 COL1A1P02452 1464 aaPredicted RBP6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 PLPP2O43688 288 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 PDCD6O75340 191 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 EIF3GO75821 320 aaKnown RBP eCLIP6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TMEM50BP56557 158 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 HIST1H1AQ02539 215 aaPredicted RBP6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 MRPL43Q8N983 215 aaKnown RBP6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 OR2Y1Q8NGV0 311 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 OR10AC1Q8NH08 325 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 FAM216AQ8WUB2 273 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TMEM70Q9BUB7 260 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 NKX2-6A6NCS4 301 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 MVDP53602 400 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 ZNF273Q14593 569 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 MORN1Q5T089 497 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TMEM78Q5T7P6 136 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 RTL10Q7L3V2 364 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 ANKRD37Q7Z713 158 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 BIVMQ86UB2 503 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 CYB561D1Q8N8Q1 229 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 PHOSPHO2Q8TCD6 241 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 ZNF384Q8TF68 577 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 MRGPRFQ96AM1 343 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 RAB1BQ9H0U4 201 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 PHLDA3Q9Y5J5 127 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 ARFGEF2Q9Y6D5 1785 aa6.95□□□□□ -1.3
RBFOX2-205ENST00000405409 TRAV12-3A0A0B4J271 114 aa6.94□□□□□ -1.3
RBFOX2-205ENST00000405409 A0A1B0GTH9 108 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms