RNA–Protein interactions for RNA: ENST00000403162.7

CCDC47-202, Transcript of coiled-coil domain containing 47, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CCDC47, Length 2,195 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC47-202ENST00000403162 SPIN3Q5JUX0 258 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 DPPA3Q6W0C5 159 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 GGNQ86UU5 652 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 TOLLIPQ9H0E2 274 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 MAGT1Q9H0U3 335 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 IL17BQ9UHF5 180 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 LIPGQ9Y5X9 500 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 NAPSAO96009 420 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 VDAC1P21796 283 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 CLDN15P56746 228 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 MLF1P58340 268 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 UBE2KP61086 200 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 RTP5Q14D33 572 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 HAGHQ16775 308 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 CEACAM16Q2WEN9 425 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 ABLIM2Q6H8Q1 611 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 RPS19BP1Q86WX3 136 aaKnown RBP16.99■□□□□ 0.31
CCDC47-202ENST00000403162 GAPTQ8N292 157 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 PLPPR1Q8TBJ4 325 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 RBMXL1Q96E39 390 aaKnown RBP16.99■□□□□ 0.31
CCDC47-202ENST00000403162 C1QTNF5Q9BXJ0 243 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 SIRT7Q9NRC8 400 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 TINAGQ9UJW2 476 aa16.99■□□□□ 0.31
CCDC47-202ENST00000403162 CXorf65A6NEN9 183 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 TUSC2O75896 110 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 TMEM50AO95807 157 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 FBP1P09467 338 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 RAB2AP61019 212 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 ZNF429Q86V71 674 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 ZNF587BE7ETH6 402 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 HBE1P02100 147 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 CDX1P47902 265 aaPredicted RBP16.98■□□□□ 0.31
CCDC47-202ENST00000403162 DLK1P80370 383 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 ELOBQ15370 118 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 IL22RA2Q969J5 263 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 GGACTQ9BVM4 153 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 PRDM14Q9GZV8 571 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 GPR35Q9HC97 309 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 MMP24Q9Y5R2 645 aa16.98■□□□□ 0.31
CCDC47-202ENST00000403162 SLC22A20A6NK97 555 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 ZNF727A8MUV8 499 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 H0YL77 283 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 CST7O76096 145 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 EPHA1P21709 976 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 TLE4Q04727 773 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 OR8G1Q15617 311 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 AKR1C8PQ5T2L2 129 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 CLDND2Q8NHS1 167 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 CPNE4Q96A23 557 aaPredicted RBP16.97■□□□□ 0.31
CCDC47-202ENST00000403162 TVP23CQ96ET8 276 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 ATP5SQ99766 215 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 WSB1Q9Y6I7 421 aa16.97■□□□□ 0.31
CCDC47-202ENST00000403162 MMP7P09237 267 aaPredicted RBP16.96■□□□□ 0.31
CCDC47-202ENST00000403162 SPINK2P20155 84 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 IL24Q13007 206 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 HERPUD1Q15011 391 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 SLC35E3Q7Z769 313 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 YRDCQ86U90 279 aaKnown RBP16.96■□□□□ 0.31
CCDC47-202ENST00000403162 SAXO1Q8IYX7 474 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 CYB561D1Q8N8Q1 229 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 OR5D13Q8NGL4 314 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 Q8WTZ3 238 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 IGKV1D-13A0A0B4J2D9 117 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 CXCL13O43927 109 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 SCTP09683 121 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 IGKV1-13P0DP09 117 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 BCL3P20749 454 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 KHDC3LQ587J8 217 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 ZNF468Q5VIY5 522 aaPredicted RBP16.96■□□□□ 0.31
CCDC47-202ENST00000403162 COLCA1Q6ZS62 124 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 LINC00469Q8N7U9 141 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 OR10G4Q8NGN3 311 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 ADGRG7Q96K78 797 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 NIPSNAP3BQ9BS92 247 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 RNF115Q9Y4L5 304 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 DMRT1Q9Y5R6 373 aa16.96■□□□□ 0.31
CCDC47-202ENST00000403162 H0Y980 276 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 YIF1AO95070 293 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 TAS2R30P59541 319 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 FGF12P61328 243 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 RUNX1Q01196 453 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 VASH2Q86V25 355 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 BATF2Q8N1L9 274 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 TMEM217Q8N7C4 229 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 SGCZQ96LD1 299 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 TRAV1-1A0A0B4J248 108 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 KIR2DS1A0A191URI9 304 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 IFITM10A6NMD0 228 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 CHST1O43916 411 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 CTXN2P0C2S0 81 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 KIR2DS4P43632 304 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 PAX9P55771 341 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 KIR2DS1Q14954 304 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 ZNF610Q8N9Z0 462 aa16.95■□□□□ 0.3
CCDC47-202ENST00000403162 A0A0G2JMM0 328 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 A0A1W2PPB8 328 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 A0A1W2PRS3 328 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 KIR3DP1A8MWS1 328 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 CXCL1P09341 107 aa16.94■□□□□ 0.3
CCDC47-202ENST00000403162 GLIPR1P48060 266 aa16.94■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms