RNA–Protein interactions for RNA: ENST00000403136.1

CEACAM1-206, Transcript of carcinoembryonic antigen related cell adhesion molecule 1, humanhuman

TSL 1 (best)

Gene CEACAM1, Length 1,778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CEACAM1-206ENST00000403136 GOSR2O14653 212 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 TUSC2O75896 110 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 SIX6O95475 246 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 GIPP09681 153 aaPredicted RBP11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 SUPT4H1P63272 117 aaKnown RBP11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 PAX5Q02548 391 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 CLEC18BQ6UXF7 455 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 TGIF2LYQ8IUE0 185 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 PPP1R35Q8TAP8 253 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 KIRREL1Q96J84 757 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 CABLES2Q9BTV7 478 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 RANBP3Q9H6Z4 567 aaPredicted RBP11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 SAP30LQ9HAJ7 183 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 TAF9BQ9HBM6 251 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 KCNIP1Q9NZI2 227 aa11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 SPTBN1Q01082 2364 aaKnown RBP11.13□□□□□ -0.63
CEACAM1-206ENST00000403136 PKDREJQ9NTG1 2253 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 CACNA1DQ01668 2161 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 RPS2P15880 293 aaKnown RBP11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 MUC1P15941 1255 aaPredicted RBP11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 HLA-GP17693 338 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 ERP29P30040 261 aaKnown RBP11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 GLIPR1P48060 266 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 H2BFSP57053 126 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 HMGN3Q15651 99 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 KCNJ8Q15842 424 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 KRBOX4Q5JUW0 171 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 TEX36Q5VZQ5 186 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 LPCAT3Q6P1A2 487 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 SLC38A6Q8IZM9 456 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 MUC15Q8N387 334 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 DEFB108BQ8NET1 73 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 OR10J5Q8NHC4 309 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 RSRP1Q9BUV0 290 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 DCAF16Q9NXF7 216 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 MAB21L2Q9Y586 359 aa11.12□□□□□ -0.63
CEACAM1-206ENST00000403136 SMG1Q96Q15 3661 aaKnown RBP11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 A0A0B4J2A0 478 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 K7N7A8 449 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 MGST3O14880 152 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 PIGPP57054 158 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 RAP2BP61225 183 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 SLC9A3R2Q15599 337 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 ABCA11PQ4W5N1 156 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 LIN54Q6MZP7 749 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 C11orf88Q6PI97 169 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 KCTD9Q7L273 389 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 SGPP2Q8IWX5 399 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 OR2T35Q8NGX2 323 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 IL1F10Q8WWZ1 152 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 WDR89Q96FK6 387 aaPredicted RBP11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 SDSLQ96GA7 329 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 HYLS1Q96M11 299 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 SHPKQ9UHJ6 478 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 ABCA4P78363 2273 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 TEX13DA0A0J9YY54 714 aaPredicted RBP11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 OOEPA6NGQ2 149 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 CRYM-AS1A6NIL9 109 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 B8ZZF3 427 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 NPIPB11E5RHQ5 1161 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 HEXAP06865 529 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 GNRHRP30968 328 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 LY6G6FQ5SQ64 297 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 DCAF12L2Q5VW00 463 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 STUMQ69YW2 141 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 H1FOOQ8IZA3 346 aaPredicted RBP11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 PRR18Q8N4B5 295 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 ZNF561Q8N587 486 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 TPRX1Q8N7U7 411 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 ZNRF1Q8ND25 227 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 ZNF486Q96H40 463 aaPredicted RBP11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 LURAP1Q96LR2 239 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 KCNIP3Q9Y2W7 256 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 OR2W1Q9Y3N9 320 aa11.11□□□□□ -0.63
CEACAM1-206ENST00000403136 HCFC1P51610 2035 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 DBX1A6NMT0 343 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 C12orf77C9JDV5 145 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 TMEM178BH3BS89 294 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 DNASE1P24855 282 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 SNRPD2P62316 118 aaKnown RBP11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 ANKRD55Q3KP44 614 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 PHLDA2Q53GA4 152 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 Q5BKY6 102 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 C6orf183Q5T699 404 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 C1orf87Q8N0U7 546 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 ZNF565Q8N9K5 539 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 OR5D13Q8NGL4 314 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 OR5M8Q8NGP6 311 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 COQ8AQ8NI60 647 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 UBALD1Q8TB05 177 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 MRGPRDQ8TDS7 321 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 RTN4IP1Q8WWV3 396 aaPredicted RBP11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 ASB13Q8WXK3 278 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 CCL17Q92583 94 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 BBC3Q96PG8 261 aaPredicted RBP11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 SLC2A9Q9NRM0 540 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 TMEM106BQ9NUM4 274 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 OR1A1Q9P1Q5 309 aa11.1□□□□□ -0.63
CEACAM1-206ENST00000403136 CFAP46Q8IYW2 2715 aa11.09□□□□□ -0.63
CEACAM1-206ENST00000403136 IGKV1D-13A0A0B4J2D9 117 aa11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms