RNA–Protein interactions for RNA: ENST00000397491.6

CHL1-202, Transcript of cell adhesion molecule L1 like, humanhuman

TSL 1 (best) BASIC

Gene CHL1, Length 5,235 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHL1-202ENST00000397491 TRBV5-5A0A0J9YX44 114 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 RBP4P02753 201 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 S100A4P26447 101 aaKnown RBP13.17□□□□□ -0.3
CHL1-202ENST00000397491 DSCR4P56555 118 aaPredicted RBP13.17□□□□□ -0.3
CHL1-202ENST00000397491 EIF3IQ13347 325 aaKnown RBP13.17□□□□□ -0.3
CHL1-202ENST00000397491 TMEM178AQ8NBL3 297 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 TMEM116Q8NCL8 245 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 OR4F17Q8NGA8 305 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 RNF133Q8WVZ7 376 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 SMIM12Q96EX1 92 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 CD8AP01732 235 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 PSG2P11465 335 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 EFNB1P98172 346 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 FDX2Q6P4F2 183 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 PDPNQ86YL7 162 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 LYG1Q8N1E2 194 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 OR1L3Q8NH93 324 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 MISP3Q96FF7 219 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 MRGPRX3Q96LB0 322 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 FABP2P12104 132 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 ORM2P19652 201 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 ZNF137PP52743 207 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 MFAP2P55001 183 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 TEX30Q5JUR7 227 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 EGLN1Q9GZT9 426 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 DEFB127Q9H1M4 99 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 TMEM140Q9NV12 185 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 MELTFP08582 738 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 NMUP48645 174 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 ABHD14AQ9BUJ0 271 aa13.17□□□□□ -0.3
CHL1-202ENST00000397491 MT-ND6P03923 174 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 HERPUD1Q15011 391 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 TMEM211Q6ICI0 200 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 SLC35E4Q6ICL7 350 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 MRGPRDQ8TDS7 321 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 R3HDM4Q96D70 268 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 NGBQ9NPG2 151 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 SMCHD1A6NHR9 2005 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 DHRS7CA6NNS2 312 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 ERVFRD-1P60508 538 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 VSTM2LQ96N03 204 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 MRPL18Q9H0U6 180 aaKnown RBP13.16□□□□□ -0.3
CHL1-202ENST00000397491 DNAJC4Q9NNZ3 241 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 SCN1AP35498 2009 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 SMIM17P0DL12 118 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 HOXA5P20719 270 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 COL8A1P27658 744 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 ZNF519Q8TB69 540 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 GRIFINA4D1Z8 144 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 SPINK2P20155 84 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 CPEB3Q8NE35 698 aaKnown RBP13.16□□□□□ -0.3
CHL1-202ENST00000397491 OR52L2PQ8NGH6 319 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 MOB3AQ96BX8 217 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 P2RX4Q99571 388 aa13.16□□□□□ -0.3
CHL1-202ENST00000397491 IGHV3-13P01766 116 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 IGHV3-7P01780 117 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 CCL2P13500 99 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 C16orf47Q6ZP98 133 aaPredicted RBP13.15□□□□□ -0.3
CHL1-202ENST00000397491 ABHD3Q8WU67 409 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 MRGPRX1Q96LB2 322 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 TRIP11Q15643 1979 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 OR8I2Q8N0Y5 310 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 OR6X1Q8NH79 312 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 GNRHR2Q96P88 292 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 RPS23P62266 143 aaKnown RBP13.15□□□□□ -0.3
CHL1-202ENST00000397491 VMA21Q3ZAQ7 101 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 LHX8Q68G74 356 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 ATOH7Q8N100 152 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 C5orf17Q8NAS9 161 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 RAB37Q96AX2 223 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 BOD1Q96IK1 185 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 FER1L6-AS2Q96M78 137 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 PIPOXQ9P0Z9 390 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 OR2W1Q9Y3N9 320 aa13.15□□□□□ -0.3
CHL1-202ENST00000397491 A0A1W2PP11 408 aa13.15□□□□□ -0.31
CHL1-202ENST00000397491 IGSF23A1L1A6 192 aa13.15□□□□□ -0.31
CHL1-202ENST00000397491 HIST1H1EP10412 219 aaKnown RBP13.15□□□□□ -0.31
CHL1-202ENST00000397491 FSTP19883 344 aa13.15□□□□□ -0.31
CHL1-202ENST00000397491 AGAP20933 346 aa13.15□□□□□ -0.31
CHL1-202ENST00000397491 SRSF9Q13242 221 aaKnown RBP eCLIP13.15□□□□□ -0.31
CHL1-202ENST00000397491 OIT3Q8WWZ8 545 aa13.15□□□□□ -0.31
CHL1-202ENST00000397491 PARLQ9H300 379 aa13.15□□□□□ -0.31
CHL1-202ENST00000397491 ZFP30Q9Y2G7 519 aa13.15□□□□□ -0.31
CHL1-202ENST00000397491 ICE1Q9Y2F5 2266 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 HAND1O96004 215 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 ALKBH6Q3KRA9 238 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 C5orf66Q9H5L9 145 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 ECM29Q5VYK3 1845 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 PNLIPP16233 465 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 C2orf68Q2NKX9 166 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 SLC25A34Q6PIV7 304 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 OR2V2Q96R30 315 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 SPSB2Q99619 263 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 SIT1Q9Y3P8 196 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 SRSF5Q13243 272 aaKnown RBP13.14□□□□□ -0.31
CHL1-202ENST00000397491 RIGQ13278 110 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 AQP3Q92482 292 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 CISD1Q9NZ45 108 aaKnown RBP13.14□□□□□ -0.31
CHL1-202ENST00000397491 AHCTF1Q8WYP5 2266 aa13.14□□□□□ -0.31
CHL1-202ENST00000397491 C19orf48Q6RUI8 117 aa13.14□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms