RNA–Protein interactions for RNA: ENST00000397200.8

CAPN3-207, Transcript of calpain 3, humanhuman

TSL 1 (best) BASIC

Gene CAPN3, Length 1,643 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-207ENST00000397200 TRAPPC2LH3BP13 241 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 J3QT63 122 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 SYNGR1O43759 233 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 RP2O75695 350 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 OR7C1O76099 320 aaPredicted RBP12.53□□□□□ -0.4
CAPN3-207ENST00000397200 NAPSAO96009 420 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 GLRA1P23415 457 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 TESK1Q15569 626 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 ANKRD55Q3KP44 614 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 FAM76BQ5HYJ3 339 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 PRAMEF6Q5VXH4 476 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 WDR86Q86TI4 376 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 PPP1R1CQ8WVI7 109 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 PDCD10Q9BUL8 212 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 SAP30LQ9HAJ7 183 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 COMMD9Q9P000 198 aa12.53□□□□□ -0.4
CAPN3-207ENST00000397200 C14orf166Q9Y224 244 aaKnown RBP12.53□□□□□ -0.4
CAPN3-207ENST00000397200 CHD3Q12873 2000 aaKnown RBP12.53□□□□□ -0.4
CAPN3-207ENST00000397200 TRBV6-7A0A0A0MS04 114 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 CRYM-AS1A6NIL9 109 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 GLAP06280 429 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 TNFRSF1AP19438 455 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 PI3P19957 117 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 CDKN1AP38936 164 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 UCP3P55916 312 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 ZNF154Q13106 437 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 GSG1LQ6UXU4 331 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 KCTD9Q7L273 389 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 KCNRGQ8N5I3 272 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 MFFQ9GZY8 342 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 SPACA1Q9HBV2 294 aa12.52□□□□□ -0.4
CAPN3-207ENST00000397200 TRBV6-6A0A0A6YYG2 114 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 A0A0D9SG52 128 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 A6NLC8 198 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 OR2F2O95006 317 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 PTBP3O95758 552 aaKnown RBP12.51□□□□□ -0.41
CAPN3-207ENST00000397200 PGAM2P15259 253 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 CYCSP99999 105 aaKnown RBP12.51□□□□□ -0.41
CAPN3-207ENST00000397200 OR2F1Q13607 317 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 SLC9A3R2Q15599 337 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 SPRNQ5BIV9 151 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 HAGHLQ6PII5 290 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-207ENST00000397200 BRICD5Q6PL45 260 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 ZNF546Q86UE3 836 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 SCCPDHQ8NBX0 429 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 MOB3AQ96BX8 217 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 SEC22AQ96IW7 307 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 ARL6Q9H0F7 186 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 UFSP2Q9NUQ7 469 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 IL36RNQ9UBH0 155 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 RNF222A6NCQ9 220 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 CDIPTO14735 213 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 NOS1APO75052 506 aaPredicted RBP12.51□□□□□ -0.41
CAPN3-207ENST00000397200 LYL1P12980 280 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 GATA4P43694 442 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 PDCD1Q15116 288 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 MOGAT3Q86VF5 341 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 IGFBPL1Q8WX77 278 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 ERGIC1Q969X5 290 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 TLNRD1Q9H1K6 362 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 TMEM165Q9HC07 324 aa12.51□□□□□ -0.41
CAPN3-207ENST00000397200 OVOL3O00110 214 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 KRTAP10-9P60411 292 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 IL15RAQ13261 267 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 SLC51BQ86UW2 128 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 OR8H3Q8N146 312 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 NEU4Q8WWR8 484 aaPredicted RBP12.5□□□□□ -0.41
CAPN3-207ENST00000397200 NRGNQ92686 78 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 GALNT14Q96FL9 552 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 GSX2Q9BZM3 304 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 Q9N2K0 584 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 GCM1Q9NP62 436 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 C1orf123Q9NWV4 160 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 PPP1R3CQ9UQK1 317 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 POLDIP2Q9Y2S7 368 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 AKAP6Q13023 2319 aa12.5□□□□□ -0.41
CAPN3-207ENST00000397200 DYSFO75923 2080 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 hCG_1807616A0A1W2PRN6 198 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 POM121CA8CG34 1229 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 IFNA2P01563 188 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 ACAA1P09110 424 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-207ENST00000397200 PRKACAP17612 351 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 PSMB6P28072 239 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 ERVK11-1P61568 191 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 C6orf183Q5T699 404 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 ZNF880Q6PDB4 577 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 ZNF826PQ6ZT77 177 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 ACOT7LQ6ZUV0 252 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 SGPP2Q8IWX5 399 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 C11orf53Q8IXP5 236 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 Q8IYB0 196 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 FAM58AQ8N1B3 248 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 BATF2Q8N1L9 274 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 POC1AQ8NBT0 407 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 RSRP1Q9BUV0 290 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 WDR13Q9H1Z4 485 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 RIMS4Q9H426 269 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-207ENST00000397200 CHMP1AQ9HD42 196 aaPredicted RBP12.49□□□□□ -0.41
CAPN3-207ENST00000397200 RDH8Q9NYR8 311 aa12.49□□□□□ -0.41
CAPN3-207ENST00000397200 KIF25Q9UIL4 384 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms