RNA–Protein interactions for RNA: ENST00000396966.6

SCNN1A-205, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

TSL 3 BASIC

Gene SCNN1A, Length 2,336 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-205ENST00000396966 SRSF7Q16629 238 aaKnown RBP eCLIP14.53□□□□□ -0.08
SCNN1A-205ENST00000396966 ABCA11PQ4W5N1 156 aa14.53□□□□□ -0.08
SCNN1A-205ENST00000396966 GGNBP1Q5YKI7 109 aa14.53□□□□□ -0.08
SCNN1A-205ENST00000396966 RIMS4Q9H426 269 aaPredicted RBP14.53□□□□□ -0.08
SCNN1A-205ENST00000396966 HSPB6O14558 160 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 HS3ST1O14792 307 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 IFNA21P01568 189 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 IGHV3-13P01766 116 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 FAM157CP0CG43 387 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 SFTPCP11686 197 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 CD40P25942 277 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 FCGR2CP31995 323 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 KLF3P57682 345 aaPredicted RBP14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 PHLDA2Q53GA4 152 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 RPL7L1Q6DKI1 246 aaKnown RBP14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 TMEM108Q6UXF1 575 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 ST6GALNAC3Q8NDV1 305 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 GTF3AQ92664 365 aaKnown RBP14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 CNTNAP3BQ96NU0 1288 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 CNTNAP3Q9BZ76 1288 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 DNAJB11Q9UBS4 358 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 IGF2RP11717 2491 aa14.52□□□□□ -0.08
SCNN1A-205ENST00000396966 IGHV3-64DA0A0J9YX35 117 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 A0A1B0GWJ7 208 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 A6NLC8 198 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 ZNF705EA8MWA4 302 aaPredicted RBP14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 ATP6V1G2-DDX39BF2Z307 99 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 SCGB1D2O95969 90 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 HKR1P10072 659 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 SRSF3P84103 164 aaKnown RBP14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 VHLLQ6RSH7 139 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 Q6ZS49 121 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 C22orf34Q6ZV56 151 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 RTN4IP1Q8WWV3 396 aaPredicted RBP14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 TLNRD1Q9H1K6 362 aa14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 LSM5Q9Y4Y9 91 aaKnown RBP14.52□□□□□ -0.09
SCNN1A-205ENST00000396966 DSPP15924 2871 aaKnown RBP14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 RAB19A4D1S5 217 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 NAPSAO96009 420 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 OR5AC1P0C628 307 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 SELENOVP59797 346 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 SPIN3Q5JUX0 258 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 UQCC3Q6UW78 93 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 RDH5Q92781 318 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 KCNIP3Q9Y2W7 256 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 CHD3Q12873 2000 aaKnown RBP14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 SHANK1Q9Y566 2161 aa14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 RP1L1Q8IWN7 2480 aaPredicted RBP14.51□□□□□ -0.09
SCNN1A-205ENST00000396966 TRAV24A0A0B4J272 114 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 SH2D1BO14796 132 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 SLC34A2O95436 690 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 RCC1P18754 421 aaPredicted RBP14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 PTAFRP25105 342 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 CA7P43166 264 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 GLP1RP43220 463 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 ZNF146Q15072 292 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 Q6P435 159 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 LRP11Q86VZ4 500 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 WFDC8Q8IUA0 241 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 OR2Z1Q8NG97 314 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 PRORYQ9H606 182 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 Q9N2K0 584 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 TMEM218A2RU14 115 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 K7EPK0 472 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 ABCD4O14678 606 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 RPL12P30050 165 aaKnown RBP14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 MDH2P40926 338 aaKnown RBP14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 MSMPQ1L6U9 139 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 PRAMEF6Q5VXH4 476 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 C11orf53Q8IXP5 236 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 FAM71E2Q8N5Q1 922 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 TMEM171Q8WVE6 324 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 NAA60Q9H7X0 242 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 TAF9BQ9HBM6 251 aa14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 MAP1BP46821 2468 aaKnown RBP14.5□□□□□ -0.09
SCNN1A-205ENST00000396966 KIR2DS1A0A191URI9 304 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 TRIM77I1YAP6 450 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 KIR2DS4P43632 304 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 KIR2DS1Q14954 304 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 OR11L1Q8NGX0 322 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 ARL11Q969Q4 196 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 SYT3Q9BQG1 590 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 NKX6-2Q9C056 277 aaPredicted RBP14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 HRH4Q9H3N8 390 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 HES4Q9HCC6 221 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 IGLV3-9A0A075B6K5 115 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 FAM74A7A6NL05 159 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 C3orf80F5H4A9 247 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 DNASE2O00115 360 aaPredicted RBP14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 DEDDO75618 318 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 OR2H2O95918 312 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 CD200P41217 278 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 TMEM187Q14656 261 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 SMCO1Q147U7 214 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 FAM74A3Q4VXF1 159 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 ZNF826PQ6ZT77 177 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 LYZL2Q7Z4W2 148 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 SMIM3Q9BZL3 60 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 TMEM231Q9H6L2 316 aa14.49□□□□□ -0.09
SCNN1A-205ENST00000396966 SLC2A9Q9NRM0 540 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms