RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 AMBPP02760 352 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 MAS1LP35410 378 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 PI4KAP42356 2102 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 GPM6AP51674 278 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 SSTP61278 116 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 LRTM2Q8N967 370 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 OR5L2Q8NGL0 311 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 SMIM7Q9BQ49 75 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 SRXN1Q9BYN0 137 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 DKKL1Q9UK85 242 aa12.29□□□□□ -0.44
CLIP2-203ENST00000395060 A0A096LPE4 126 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 A0A1W2PPZ6 126 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 GZMBP10144 247 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 PSG2P11465 335 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 ARL16Q0P5N6 197 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 ZNF726P1Q15940 193 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 SPANXN5Q5MJ07 72 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 SPSB1Q96BD6 273 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 GNPNAT1Q96EK6 184 aaPredicted RBP12.28□□□□□ -0.44
CLIP2-203ENST00000395060 SIGLEC12Q96PQ1 595 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 ATP5SQ99766 215 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 IER2Q9BTL4 223 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 A0A0J9YW62 118 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 SLC22A20A6NK97 555 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 TCAPO15273 167 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 CDS2O95674 445 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 EGR1P18146 543 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 PAX9P55771 341 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 RBM11P57052 281 aaKnown RBP12.28□□□□□ -0.44
CLIP2-203ENST00000395060 HERPUD1Q15011 391 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 Q6ZRM9 215 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 SLC35E3Q7Z769 313 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 OR1F12Q8NHA8 337 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 HIST1H2AAQ96QV6 131 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 PCGF1Q9BSM1 259 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 OR14J1Q9UGF5 321 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 PPP1R3CQ9UQK1 317 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 A0A087WWC5 75 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 TAS2R30P59541 319 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 TAS2R60P59551 318 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 PMS2P11Q13670 270 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 SPIN2AQ99865 258 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 SPIN2BQ9BPZ2 258 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 TAAR3PQ9P1P4 343 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 FUT9Q9Y231 359 aa12.28□□□□□ -0.44
CLIP2-203ENST00000395060 A0A1B0GU03 582 aa12.27□□□□□ -0.44
CLIP2-203ENST00000395060 C9J4A7 227 aa12.27□□□□□ -0.44
CLIP2-203ENST00000395060 BCAT2O15382 392 aaPredicted RBP12.27□□□□□ -0.44
CLIP2-203ENST00000395060 SERPINE2P07093 398 aa12.27□□□□□ -0.44
CLIP2-203ENST00000395060 BCL2P10415 239 aa12.27□□□□□ -0.44
CLIP2-203ENST00000395060 MRPL41Q8IXM3 137 aaKnown RBP12.27□□□□□ -0.44
CLIP2-203ENST00000395060 SLC25A22Q9H936 323 aa12.27□□□□□ -0.44
CLIP2-203ENST00000395060 Q9N2K0 584 aa12.27□□□□□ -0.44
CLIP2-203ENST00000395060 CBLN4Q9NTU7 201 aa12.27□□□□□ -0.44
CLIP2-203ENST00000395060 CACNG5Q9UF02 275 aa12.27□□□□□ -0.44
CLIP2-203ENST00000395060 UBE2L5PA0A1B0GUS4 154 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 OR4A8P0C604 315 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 PSG4Q00888 419 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 PMP22Q01453 160 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 EXT1Q16394 746 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 KCNMB1Q16558 191 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 ZDHHC23Q8IYP9 409 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 M1APQ8TC57 530 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 ZFHX4Q86UP3 3567 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 CACNA1EQ15878 2313 aa12.27□□□□□ -0.45
CLIP2-203ENST00000395060 A0A0U1RQK1 487 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 NR2C1P13056 603 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 GZMHP20718 246 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ZXDAP98168 799 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 C21orf62-AS1Q17RA5 79 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 CEACAM16Q2WEN9 425 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 LHFPL2Q6ZUX7 228 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ZIC4Q8N9L1 334 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 OR10A7Q8NGE5 316 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 GPR146Q96CH1 333 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 RBMXL1Q96E39 390 aaKnown RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 RCC1LQ96I51 464 aaKnown RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 SIRT7Q9NRC8 400 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ERRFI1Q9UJM3 462 aaPredicted RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ELOA3CA0A087WX78 387 aaPredicted RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ARGFXA6NJG6 315 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ZNF732B4DXR9 585 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 CYB5R3P00387 301 aaPredicted RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 MSX1P28360 303 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 ZFP36L1Q07352 338 aaKnown RBP12.26□□□□□ -0.45
CLIP2-203ENST00000395060 SPINK9Q5DT21 86 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 RHBDD2Q6NTF9 364 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 TMPRSS7Q7RTY8 843 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 VASH2Q86V25 355 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 PLPPR1Q8TBJ4 325 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 C11orf1Q9H5F2 150 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 KCNS2Q9ULS6 477 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 IGKV1-6A0A0C4DH72 117 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 CA11O75493 328 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 TRAPPC6AO75865 159 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 HBE1P02100 147 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 EDN3P14138 238 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 VDAC1P21796 283 aa12.26□□□□□ -0.45
CLIP2-203ENST00000395060 FAM3BP58499 235 aaPredicted RBP12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms