RNA–Protein interactions for RNA: ENST00000394272.7

HDDC3-202, Transcript of HD domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene HDDC3, Length 1,880 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-202ENST00000394272 FAHD2AQ96GK7 314 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 RTBDNQ9BSG5 229 aaPredicted RBP16.93■□□□□ 0.3
HDDC3-202ENST00000394272 FXYD6Q9H0Q3 95 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 MED28Q9H204 178 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 ZNF665Q9H7R5 613 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 RALYQ9UKM9 306 aaKnown RBP16.93■□□□□ 0.3
HDDC3-202ENST00000394272 MEIKINA0A087WXM9 373 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 TRBV6-7A0A0A0MS04 114 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 A0A1B0GW55 424 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 BET1O15155 118 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 DUX4L2P0CJ85 424 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 DUX4L3P0CJ86 424 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 DUX4L4P0CJ87 422 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 DUX4L5P0CJ88 424 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 DUX4L6P0CJ89 424 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 DUX4L7P0CJ90 424 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 SELLP14151 372 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 FCN2Q15485 313 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 C4orf46Q504U0 113 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 DUX4L9Q6RFH8 374 aaPredicted RBP16.93■□□□□ 0.3
HDDC3-202ENST00000394272 TPRX1Q8N7U7 411 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 TMEM185AQ8NFB2 350 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 MOB3AQ96BX8 217 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 KIRREL1Q96J84 757 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 ST6GAL2Q96JF0 529 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 CCL13Q99616 98 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 TAF9BQ9HBM6 251 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 DUX4Q9UBX2 424 aa16.93■□□□□ 0.3
HDDC3-202ENST00000394272 SIGLEC5O15389 551 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 TUSC2O75896 110 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 AADACP22760 399 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 HFEQ30201 348 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 MUC20Q8N307 709 aaPredicted RBP16.92■□□□□ 0.3
HDDC3-202ENST00000394272 TMEM230Q96A57 120 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 RAB1BQ9H0U4 201 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 FAM234AQ9H0X4 552 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 DNTTIP1Q9H147 329 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 ZNF69Q9UC07 566 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 DCHS2Q6V1P9 2916 aa16.92■□□□□ 0.3
HDDC3-202ENST00000394272 NPIPB11E5RHQ5 1161 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 TNFRSF13BO14836 293 aaPredicted RBP16.91■□□□□ 0.3
HDDC3-202ENST00000394272 DIRAS3O95661 229 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 PPYP01298 95 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 TAS2R31P59538 309 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 DHRS2Q13268 280 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 EDDM3AQ14507 147 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 OR11H7Q8NGC8 314 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 OR5D13Q8NGL4 314 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 ZNF431Q8TF32 576 aaPredicted RBP16.91■□□□□ 0.3
HDDC3-202ENST00000394272 SPOCK3Q9BQ16 436 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 SLC23A1Q9UHI7 598 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 LAMP3Q9UQV4 416 aa16.91■□□□□ 0.3
HDDC3-202ENST00000394272 C12orf77C9JDV5 145 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 SSNA1O43805 119 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 PI3P19957 117 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 ZBTB25P24278 435 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 UCP3P55916 312 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 UBE2MP61081 183 aaKnown RBP16.9■□□□□ 0.3
HDDC3-202ENST00000394272 DHODHQ02127 395 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 PPP1R1AQ13522 171 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 FAM216BQ8N7L0 139 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 OR13A1Q8NGR1 328 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 NCOR1P1Q9H4R4 102 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 KCNIP1Q9NZI2 227 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 ODAMA1E959 279 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 A8MV72 311 aaPredicted RBP16.9■□□□□ 0.3
HDDC3-202ENST00000394272 CTSDP07339 412 aaPredicted RBP16.9■□□□□ 0.3
HDDC3-202ENST00000394272 HNRNPCP07910 306 aaKnown RBP eCLIP16.9■□□□□ 0.3
HDDC3-202ENST00000394272 SULT1A3P0DMM9 295 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 SULT1A4P0DMN0 295 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 PGAM2P15259 253 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 COL8A2P25067 703 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 ERP29P30040 261 aaKnown RBP16.9■□□□□ 0.3
HDDC3-202ENST00000394272 P2RX3P56373 397 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 IL13RA1P78552 427 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 CR1LQ2VPA4 569 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 TMEM128Q5BJH2 165 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 C6orf183Q5T699 404 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 MRGPRDQ8TDS7 321 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 LURAP1Q96LR2 239 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 UBTD1Q9HAC8 227 aa16.9■□□□□ 0.3
HDDC3-202ENST00000394272 NKX6-3A6NJ46 265 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 BOLA2-SMG1P6H3BVE0 249 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 RP2O75695 350 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 HLA-AP01891 365 aaKnown RBP16.89■□□□□ 0.29
HDDC3-202ENST00000394272 ZNF728P0DKX0 622 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 AKR1C4P17516 323 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 FXYD4P59646 89 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 HERV-K104P61576 105 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 LYG2Q86SG7 212 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 H1FOOQ8IZA3 346 aaPredicted RBP16.89■□□□□ 0.29
HDDC3-202ENST00000394272 PRR18Q8N4B5 295 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 OR10J5Q8NHC4 309 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 IL1F10Q8WWZ1 152 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 TOMM40LQ969M1 308 aa16.89■□□□□ 0.29
HDDC3-202ENST00000394272 C9orf170A2RU37 121 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 LYNX1G3V0Z9 82 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 TMPRSS2O15393 492 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 FSTL3O95633 263 aa16.88■□□□□ 0.29
HDDC3-202ENST00000394272 LYNX1P0DP58 116 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms