RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 AIPO00170 330 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 TOR1AO14656 332 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 ARL6IP5O75915 188 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 NDUFA7O95182 113 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 IGLV1-47P01700 117 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 MT-ND4P03905 459 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 PSMA1P25786 263 aaKnown RBP6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 HTR1DP28221 377 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 KCNJ3P48549 501 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 RPS27AP62979 156 aaKnown RBP6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 QRFPP83859 136 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 DIAPH2-AS1Q14236 149 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 TRAM1Q15629 374 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 NEDD8Q15843 81 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 C1orf100Q5SVJ3 147 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 SYT6Q5T7P8 510 aaPredicted RBP6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 UBE2UQ5VVX9 321 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 C22orf42Q6IC83 251 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 SLC35E4Q6ICL7 350 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF773Q6PK81 442 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF497Q6ZNH5 498 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 GDPGP1Q6ZNW5 385 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 C6orf201Q7Z4U5 140 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 SVOPQ8N4V2 548 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF565Q8N9K5 539 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR6M1Q8NGM8 313 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR4F5Q8NH21 305 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 LINC01006Q8NI28 216 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 WFDC12Q8WWY7 111 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 ARL11Q969Q4 196 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 MALSU1Q96EH3 234 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 MRPS24Q96EL2 167 aaKnown RBP6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 SULT4A1Q9BR01 284 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 TMEM59Q9BXS4 323 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 CST11Q9H112 138 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 PCDHB16Q9NRJ7 776 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 ABCB10Q9NRK6 738 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 PSG11Q9UQ72 335 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 TCF19Q9Y242 345 aa6.18□□□□□ -1.42
HMGB3P1-201ENST00000393368 A0A087X0M5 115 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 A0A1B0GX30 115 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 CLPSL1A2RUU4 121 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 A6NDX4 124 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 VGLL3A8MV65 326 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 TMEM14DPA8MWL7 114 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 NPIPB11E5RHQ5 1161 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 C15orf65H3BRN8 121 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 BUB1B-PAK6H3BSN5 160 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 F2RL2O00254 374 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 CCRL2O00421 344 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 SDCBPO00560 298 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 SLC17A2O00624 439 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 SLC31A2O15432 143 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 SOCS1O15524 211 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 PDCD6O75340 191 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 BPNT1O95861 308 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 UBBP0CG47 229 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 CD37P11049 281 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 ARSBP15848 533 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 RCC1P18754 421 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 FUT3P21217 361 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 CHATP28329 748 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 CD34P28906 385 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 PAX5Q02548 391 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 HABP2Q14520 560 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 RAB11BQ15907 218 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 HLA-DRB5Q30154 266 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 LINC01559Q495D7 138 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 TPTE2P1Q5T6R2 138 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 MINOS1Q5TGZ0 78 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 OLFML2AQ68BL7 652 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR52W1Q6IF63 320 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 Q6ZPA2 131 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 NR2C2APQ86WQ0 139 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR51D1Q8NGF3 324 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR10V1Q8NGI7 309 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR9G1Q8NH87 305 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR1L1Q8NH94 360 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF596Q8TC21 504 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 MRPL30Q8TCC3 161 aaKnown RBP6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 HDHD3Q9BSH5 251 aaPredicted RBP6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 FAAP24Q9BTP7 215 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 ZNF747Q9BV97 191 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 LPAR5Q9H1C0 372 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 MMP28Q9H239 520 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 OR51E2Q9H255 320 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 RNF167Q9H6Y7 350 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 BEX1Q9HBH7 125 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 SPACA1Q9HBV2 294 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 DPM3Q9P2X0 92 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 GHRLQ9UBU3 117 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 TRAPPC2LQ9UL33 140 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 RNF114Q9Y508 228 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 LRRC42Q9Y546 428 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 MINOS1-NBL1R4GNA1 71 aa6.17□□□□□ -1.42
HMGB3P1-201ENST00000393368 TMEM272A0A1B0GTI8 110 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 TRDV1A0A1B0GX56 115 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 SH2D7A6NKC9 451 aaPredicted RBP6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 LEUTXA8MZ59 168 aa6.16□□□□□ -1.42
HMGB3P1-201ENST00000393368 LY6LH3BQJ8 138 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms