RNA–Protein interactions for RNA: ENST00000392128.6

SMARCAL1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SMARCAL1, Length 2,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-203ENST00000392128 SLC2A9Q9NRM0 540 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 NDRG3Q9UGV2 375 aa9.62□□□□□ -0.87
SMARCAL1-203ENST00000392128 TEX13DA0A0J9YY54 714 aaPredicted RBP9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 NKX2-6A6NCS4 301 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 CCSO14618 274 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 S100A6P06703 90 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 CD55P08174 381 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 OR3A1P47881 315 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 SNRPD2P62316 118 aaKnown RBP9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 COL10A1Q03692 680 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 FGL1Q08830 312 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 HMGN3Q15651 99 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 LGALSLQ3ZCW2 172 aaPredicted RBP9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 DMRTC2Q8IXT2 367 aaPredicted RBP9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 CD177Q8N6Q3 437 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 Q8TCH9 128 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 RTN4IP1Q8WWV3 396 aaPredicted RBP9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 GALNT14Q96FL9 552 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 PLPPR2Q96GM1 343 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 PDCD10Q9BUL8 212 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 NAA60Q9H7X0 242 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 GCM1Q9NP62 436 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 HMSDA8MTL9 139 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 PSG2P11465 335 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 PRDX2P32119 198 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 RBMXP38159 391 aaKnown RBP9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 H1FOOQ8IZA3 346 aaPredicted RBP9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 FAM185AQ8N0U4 392 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 CCDC71LQ8N9Z2 235 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 OR10J5Q8NHC4 309 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 KIRREL1Q96J84 757 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 DNAJB11Q9UBS4 358 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 KCNIP3Q9Y2W7 256 aa9.61□□□□□ -0.87
SMARCAL1-203ENST00000392128 IGKV1D-17A0A075B6S4 117 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 C17orf100A8MU93 164 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 GNRHRP30968 328 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 GSG1LQ6UXU4 331 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 CA5BP1Q8WTZ4 195 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 COQ2Q96H96 371 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 SHARPINQ9H0F6 387 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 RNF7Q9UBF6 113 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 METRNQ9UJH8 293 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 ERRFI1Q9UJM3 462 aaPredicted RBP9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 TRAV14DV4A0A0A6YYC5 116 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 ZNF737O75373 536 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 CD3EP07766 207 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 SERPINF1P36955 418 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 RND3P61587 244 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 PHLDA2Q53GA4 152 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 FAM222BQ8WU58 562 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 SEC22AQ96IW7 307 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 SUCNR1Q9BXA5 334 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 NMES1Q9C002 83 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 PRR13Q9NZ81 148 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 OR2W1Q9Y3N9 320 aa9.6□□□□□ -0.87
SMARCAL1-203ENST00000392128 SMG1Q96Q15 3661 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 ITPR1Q14643 2758 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 ICE1Q9Y2F5 2266 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 TRAV39A0A0B4J263 110 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 IGKV1D-13A0A0B4J2D9 117 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 C5orf51A6NDU8 294 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 OOEPA6NGQ2 149 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 E7EQL1 145 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 M0R233 179 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 TFF1P04155 84 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 IGKV1-13P0DP09 117 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 TNFRSF1AP19438 455 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 GRNP28799 593 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 CYCSP99999 105 aaKnown RBP9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 AESQ08117 197 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 CDSNQ15517 529 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 TESK1Q15569 626 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 ZNF600Q6ZNG1 722 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 LDLRAD3Q86YD5 345 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 ZNF565Q8N9K5 539 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 OR11L1Q8NGX0 322 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 LINC01560Q8TB33 94 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 VRK1Q99986 396 aaPredicted RBP9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 TAF9BQ9HBM6 251 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 KCNJ16Q9NPI9 418 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 KCNIP1Q9NZI2 227 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 COMMD9Q9P000 198 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 KIF25Q9UIL4 384 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 DYSFO75923 2080 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 CACNA1DQ01668 2161 aa9.59□□□□□ -0.87
SMARCAL1-203ENST00000392128 GPR31O00270 319 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 ADAP1O75689 374 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 OR5AC1P0C628 307 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 TLE1Q04724 770 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 TMEM187Q14656 261 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 KRBOX4Q5JUW0 171 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 LRTM2Q8N967 370 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 BOLLQ8N9W6 283 aaKnown RBP9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 PPP1R35Q8TAP8 253 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 PPP1R1CQ8WVI7 109 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 SECTM1Q8WVN6 248 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 IL1F10Q8WWZ1 152 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 SNX22Q96L94 193 aa9.58□□□□□ -0.88
SMARCAL1-203ENST00000392128 SLC5A7Q9GZV3 580 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 51.4 ms