RNA–Protein interactions for RNA: ENST00000390467.3

TRAV40-201, Transcript of T cell receptor alpha variable 40, humanhuman

APPRIS P1 BASIC

Gene TRAV40, Length 317 nt, Biotype TR V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV40-201ENST00000390467 H7C2Y5 167 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 M0QYV0 167 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 M0R1B8 84 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 MFNGO00587 321 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 FABP7O15540 132 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CRXO43186 299 aaPredicted RBP1.33□□□□□ -2.2
TRAV40-201ENST00000390467 ORC5O43913 435 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 UGT2B11O75310 529 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 OR2J2O76002 312 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CLIC3O95833 236 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 MT-CO2P00403 227 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 IGHV2-5P01817 119 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 FGF1P05230 155 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 HTR1AP08908 422 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CSF3P09919 207 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 GKN3PP0CG01 181 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CT45A6P0DMU7 189 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CT45A5P0DMU8 189 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CT45A7P0DMV0 189 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CYBAP13498 195 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 FOLR1P15328 257 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 GABRG2P18507 467 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 TAC1P20366 129 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 HIST1H1TP22492 207 aaPredicted RBP1.33□□□□□ -2.2
TRAV40-201ENST00000390467 F8A1P23610 371 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 S100GP29377 79 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 IL12AP29459 219 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 RPL12P30050 165 aaKnown RBP1.33□□□□□ -2.2
TRAV40-201ENST00000390467 SDC4P31431 198 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 RCVRNP35243 200 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 HRH1P35367 487 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 RORCP51449 518 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 UBE2E1P51965 193 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CDKN2DP55273 166 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 GNG2P59768 71 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 DNAJB13P59910 316 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 RAB2AP61019 212 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 NAA20P61599 178 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 PPP1CBP62140 327 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 BTN3A2P78410 334 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 ELF3P78545 371 aaPredicted RBP1.33□□□□□ -2.2
TRAV40-201ENST00000390467 GTF2BQ00403 316 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 PSG4Q00888 419 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 RELAQ04206 551 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 FMODQ06828 376 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 ST3GAL4Q11206 333 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 TCP10Q12799 353 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 GINS1Q14691 196 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 OXA1LQ15070 435 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 TRIP13Q15645 432 aaPredicted RBP1.33□□□□□ -2.2
TRAV40-201ENST00000390467 ZNF726P1Q15940 193 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 SMIM21Q3B7S5 101 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 SLC25A35Q3KQZ1 300 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 ARHGAP11BQ3KRB8 267 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 ZBED5Q49AG3 693 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CT45A1Q5HYN5 189 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 FAM27D1Q5T7N8 215 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 HIST2H3PS2Q5TEC6 136 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 FAM78BQ5VT40 261 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 HBMQ6B0K9 141 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 LPCAT3Q6P1A2 487 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 SMARCD3Q6STE5 483 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 TMEM205Q6UW68 189 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 EPGNQ6UW88 154 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 NTM-AS1Q6ZSK4 140 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 TCF24Q7RTU0 167 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 GALNT10Q86SR1 603 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 EIF4E3Q8N5X7 224 aaKnown RBP1.33□□□□□ -2.2
TRAV40-201ENST00000390467 OR4M2Q8NGB6 313 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 OR4K17Q8NGC6 315 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 OR5AR1Q8NGP9 310 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 OR8U1Q8NH10 309 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 OR4K15Q8NH41 348 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CT45A3Q8NHU0 189 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 EEF1AKMT1Q8WVE0 214 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CLDN23Q96B33 292 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 HAUS1Q96CS2 278 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 DYNLL2Q96FJ2 89 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 MRAP2Q96G30 205 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 PYURFQ96I23 114 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 HSFY1Q96LI6 401 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 UBE2E2Q96LR5 201 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 COL21A1Q96P44 957 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 SCGB3A2Q96PL1 93 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 SIGMAR1Q99720 223 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 GABRG3Q99928 467 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 C20orf144Q9BQM9 153 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 GGACTQ9BVM4 153 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 MS4A8Q9BY19 250 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 CCDC90BQ9GZT6 254 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 RBKSQ9H477 322 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 PRORYQ9H606 182 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 REEP4Q9H6H4 257 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 VSIRQ9H7M9 311 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 NMNAT1Q9HAN9 279 aaPredicted RBP1.33□□□□□ -2.2
TRAV40-201ENST00000390467 LRTM1Q9HBL6 345 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 SPANXA1Q9NS26 97 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 RGS18Q9NS28 235 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 FAIMQ9NVQ4 179 aa1.33□□□□□ -2.2
TRAV40-201ENST00000390467 DDIT4Q9NX09 232 aa1.33□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms