RNA–Protein interactions for RNA: ENST00000382004.7

RFX3-204, Transcript of regulatory factor X3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFX3, Length 9,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-204ENST00000382004 PHLDA3Q9Y5J5 127 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 PMELP40967 661 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 NPBWR2P48146 333 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 TMEM95Q3KNT9 176 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 OR4B1Q8NGF8 309 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 PSMB11A5LHX3 300 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 EML2O95834 649 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 ZNF506Q5JVG8 444 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 PGLYRP4Q96LB8 373 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 WNT5BQ9H1J7 359 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 HEXA-AS1Q9H8Q6 139 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 DNAJB12Q9NXW2 375 aaKnown RBP5.17□□□□□ -1.58
RFX3-204ENST00000382004 CLN8Q9UBY8 286 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.17□□□□□ -1.58
RFX3-204ENST00000382004 STAG3L3P0CL85 134 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 PF4V1P10720 104 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 SLC25A1P53007 311 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 NUBP1P53384 320 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 RELQ04864 619 aaPredicted RBP5.17□□□□□ -1.58
RFX3-204ENST00000382004 SPINK14Q6IE38 97 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 THSD4Q6ZMP0 1018 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 CNRIP1Q96F85 164 aaPredicted RBP5.17□□□□□ -1.58
RFX3-204ENST00000382004 PRNDQ9UKY0 176 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 OR51B2Q9Y5P1 312 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 SRFP11831 508 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 VDAC1P21796 283 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 TEPPQ6URK8 271 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 C16orf47Q6ZP98 133 aaPredicted RBP5.17□□□□□ -1.58
RFX3-204ENST00000382004 FAM169BQ8N8A8 192 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 OR1L8Q8NGR8 309 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 ZNF275Q9NSD4 429 aaPredicted RBP5.17□□□□□ -1.58
RFX3-204ENST00000382004 IGLV3-10A0A075B6K4 115 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 A0A1B0GU03 582 aa5.17□□□□□ -1.58
RFX3-204ENST00000382004 SUMO2P61956 95 aaKnown RBP5.17□□□□□ -1.58
RFX3-204ENST00000382004 ZNF324BQ6AW86 544 aaPredicted RBP5.17□□□□□ -1.58
RFX3-204ENST00000382004 A0A1W2PPE3 182 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 C7orf77A4D0Y5 90 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ZFPL1O95159 310 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 SMAD4Q13485 552 aaKnown RBP5.16□□□□□ -1.58
RFX3-204ENST00000382004 CTF1Q16619 201 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ASCL5Q7RTU5 278 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 RIMKLAQ8IXN7 391 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 SLC25A40Q8TBP6 338 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 RNF133Q8WVZ7 376 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 CXCL16Q9H2A7 254 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 WNT16Q9UBV4 365 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 EXOGQ9Y2C4 368 aaKnown RBP5.16□□□□□ -1.58
RFX3-204ENST00000382004 ZNF142P52746 1687 aaPredicted RBP5.16□□□□□ -1.58
RFX3-204ENST00000382004 TMEM127O75204 238 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 HBZP02008 142 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 FCGR2BP31994 310 aaPredicted RBP5.16□□□□□ -1.58
RFX3-204ENST00000382004 NSUN5P2Q63ZY6 315 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 PTOV1Q86YD1 416 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 OR8B12Q8NGG6 310 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 LSM10Q969L4 123 aaKnown RBP5.16□□□□□ -1.58
RFX3-204ENST00000382004 LINC00470Q9BZP3 86 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 GLRX2Q9NS18 164 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 HILPDAQ9Y5L2 63 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 A0A0A6YYD5 115 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 FAM74A7A6NL05 159 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 LDLRAD4O15165 306 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 IGF2P01344 180 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ID4P47928 161 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 MFAP4P55083 255 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 FAM74A4Q5TZK3 123 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ERASQ7Z444 233 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 TDHQ8IZJ6 230 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ABHD14BQ96IU4 210 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 NEU1Q99519 415 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 LRRC61Q9BV99 259 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ZNF665Q9H7R5 613 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 CCL28Q9NRJ3 127 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ADAMTS5Q9UNA0 930 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 CDK5RAP2Q96SN8 1893 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 J3QR06 171 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 CDIPTO14735 213 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 PPM1DO15297 605 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 SMIM6P0DI80 62 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 MPLP40238 635 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ACER2Q5QJU3 275 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 NT5CQ8TCD5 201 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 FAM216AQ8WUB2 273 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 GUCD1Q96NT3 240 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 TSPAN2O60636 221 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 NXPH1P58417 271 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 MRGPRGQ86SM5 289 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 MS4A4AQ96JQ5 239 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 TRAF4Q9BUZ4 470 aaPredicted RBP5.16□□□□□ -1.58
RFX3-204ENST00000382004 MAP1LC3AQ9H492 121 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 CHODLQ9H9P2 273 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 SOCS1O15524 211 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 SLC25A17O43808 307 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 PRF1P14222 555 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 ANKRD37Q7Z713 158 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 STXBP6Q8NFX7 210 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 NPFFR1Q9GZQ6 430 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 SIGLEC7Q9Y286 467 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 NKX2-6A6NCS4 301 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 LMO7DNF2Z398 122 aa5.16□□□□□ -1.58
RFX3-204ENST00000382004 SGMS2Q8NHU3 365 aa5.16□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms