RNA–Protein interactions for RNA: ENST00000378809.8

RAB3IP-203, Transcript of RAB3A interacting protein, humanhuman

TSL 5

Gene RAB3IP, Length 2,008 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-203ENST00000378809 SMCO1Q147U7 214 aa12.46□□□□□ -0.41
RAB3IP-203ENST00000378809 C3orf36Q3SXR2 165 aa12.46□□□□□ -0.41
RAB3IP-203ENST00000378809 SHEQ5VZ18 495 aa12.46□□□□□ -0.41
RAB3IP-203ENST00000378809 BOLLQ8N9W6 283 aaKnown RBP12.46□□□□□ -0.41
RAB3IP-203ENST00000378809 RRNAD1Q96FB5 475 aaKnown RBP12.46□□□□□ -0.41
RAB3IP-203ENST00000378809 ARPC5LQ9BPX5 153 aa12.46□□□□□ -0.41
RAB3IP-203ENST00000378809 TRBV6-7A0A0A0MS04 114 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 LINC00862A6NCI5 91 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 ZSCAN5BA6NJL1 495 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 SPRY3O43610 288 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 IGHV3-13P01766 116 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 NKX6-1P78426 367 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 TMEM268Q5VZI3 342 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 WFDC8Q8IUA0 241 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 MSI2Q96DH6 328 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 ZC4H2Q9NQZ6 224 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 ERRFI1Q9UJM3 462 aaPredicted RBP12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 OR2W1Q9Y3N9 320 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 LSM5Q9Y4Y9 91 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 RBM7Q9Y580 266 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 TMEM30CPA0ZSE6 113 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 LEUTXA8MZ59 168 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 CD40P25942 277 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 KCNJ3P48549 501 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 SELENOVP59797 346 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 RPS23P62266 143 aaKnown RBP12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 COMMD7Q86VX2 200 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 SLC35G3Q8N808 338 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 GALNT11Q8NCW6 608 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 OR1S1Q8NH92 325 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 TMEM171Q8WVE6 324 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 OR2V2Q96R30 315 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 CABLES2Q9BTV7 478 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 TAF9BQ9HBM6 251 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 ZNF835Q9Y2P0 537 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 SHANK1Q9Y566 2161 aa12.45□□□□□ -0.42
RAB3IP-203ENST00000378809 S100GP29377 79 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 GABRA2P47869 451 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 AESQ08117 197 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 IL15RAQ13261 267 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 TMEM108Q6UXF1 575 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 ZNF695Q8IW36 515 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 H1FOOQ8IZA3 346 aaPredicted RBP12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 LRTM2Q8N967 370 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 RELL2Q8NC24 303 aaPredicted RBP12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 LHFPL5Q8TAF8 219 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 C18orf12Q96KH6 178 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 ELOVL5Q9NYP7 299 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 KCNIP1Q9NZI2 227 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 KIF25Q9UIL4 384 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 MSGN1A6NI15 193 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 RND3P61587 244 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 SRPXP78539 464 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 COL10A1Q03692 680 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 CNTNAP3BQ96NU0 1288 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 CNTNAP3Q9BZ76 1288 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 MRPL37Q9BZE1 423 aaKnown RBP12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 TMEM222Q9H0R3 208 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 DNTTIP1Q9H147 329 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 DNAJB11Q9UBS4 358 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 TUBD1Q9UJT1 453 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 KCNS2Q9ULS6 477 aa12.44□□□□□ -0.42
RAB3IP-203ENST00000378809 A0A1B0GWJ7 208 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 TUBAL3A6NHL2 446 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 LYL1P12980 280 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 LMO1P25800 156 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 CD200P41217 278 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 ESCO2Q56NI9 601 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 MOGAT3Q86VF5 341 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 LDLRAD3Q86YD5 345 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 OR10V1Q8NGI7 309 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 HEATR1Q9H583 2144 aaKnown RBP12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 MBNL3Q9NUK0 354 aaKnown RBP12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 METRNQ9UJH8 293 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 TMED3Q9Y3Q3 217 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 WIPI2Q9Y4P8 454 aa12.43□□□□□ -0.42
RAB3IP-203ENST00000378809 FAM74A1Q5RGS3 127 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 RND1Q92730 232 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 MEGF10Q96KG7 1140 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 TRGV8A0A0C4DH27 118 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 PGLYRP1O75594 196 aaPredicted RBP12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 DEDDO75618 318 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 NMBP08949 121 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 EGR1P18146 543 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 CEACAM6P40199 344 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 OR3A1P47881 315 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 SPRNQ5BIV9 151 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 KRBOX4Q5JUW0 171 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 TPRX1Q8N7U7 411 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 OR52M1Q8NGK5 317 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 OR51H1Q8NH63 302 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 CXorf58Q96LI9 332 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 AQP10Q96PS8 301 aa12.42□□□□□ -0.42
RAB3IP-203ENST00000378809 IGLV3-9A0A075B6K5 115 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 MEX3AA1L020 520 aaKnown RBP12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 C1QTNF9BB2RNN3 333 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 K7EPK0 472 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 ABCD4O14678 606 aa12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 MBPP02686 304 aaPredicted RBP12.41□□□□□ -0.42
RAB3IP-203ENST00000378809 PRDX2P32119 198 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms