RNA–Protein interactions for RNA: ENST00000378679.7

SHROOM1-203, Transcript of shroom family member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHROOM1, Length 4,019 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-203ENST00000378679 TLE4Q04727 773 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 HAGHQ16775 308 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 Q3ZCU0 254 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 ADAD2Q8NCV1 583 aaKnown RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 HPSE2Q8WWQ2 592 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 GP6Q9HCN6 339 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 MYOZ1Q9NP98 299 aaPredicted RBP12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 SLC2A9Q9NRM0 540 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 LAMP3Q9UQV4 416 aa12.25□□□□□ -0.45
SHROOM1-203ENST00000378679 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.24□□□□□ -0.459e-13■■■□□ 18.7
SHROOM1-203ENST00000378679 SCGB2A1O75556 95 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 FGF12P61328 243 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 C1QL2Q7Z5L3 287 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 TCEAL7Q9BRU2 100 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 LRFN3Q9BTN0 628 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 TMEM14DPA8MWL7 114 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 TSTD3H0UI37 97 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 SYNGR3O43761 229 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 FAM87AP0C7U9 286 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 ACKR3P25106 362 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 ELLP55199 621 aaPredicted RBP12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 RTL8BQ17RB0 113 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 WDYHV1Q96HA8 205 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 OR2D2Q9H210 308 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 CCL28Q9NRJ3 127 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 PLXND1Q9Y4D7 1925 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 UMAD1C9J7I0 102 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 RPL36A-HNRNPH2H7BZ11 118 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 BCL2L11O43521 198 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 FCGR3AP08637 254 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 RPS16P62249 146 aaKnown RBP12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 TPRX1Q8N7U7 411 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 SLX1AQ9BQ83 275 aa12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 RCL1Q9Y2P8 373 aaKnown RBP12.24□□□□□ -0.45
SHROOM1-203ENST00000378679 CNIH1O95406 144 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 HBE1P02100 147 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 OR8U8P0C7N1 319 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 NPBWR2P48146 333 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 AESQ08117 197 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 ABLIM2Q6H8Q1 611 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 TMEM182Q6ZP80 229 aaPredicted RBP12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 GAPTQ8N292 157 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 ZIC4Q8N9L1 334 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 KLF14Q8TD94 323 aaPredicted RBP12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 LURAP1Q96LR2 239 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 OR6C3Q9NZP0 311 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 RNF7Q9UBF6 113 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 VSIG4Q9Y279 399 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 CLEC18AA5D8T8 446 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 TUBAL3A6NHL2 446 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 FCGR3BO75015 233 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 TAGLN2P37802 199 aaKnown RBP12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 CLEC18CQ8NCF0 446 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 OR10P1Q8NGE3 313 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 OR5D13Q8NGL4 314 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 ERGIC1Q969X5 290 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 COMMD5Q9GZQ3 224 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 PSENENQ9NZ42 101 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 MIOXQ9UGB7 285 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 OR5H1A6NKK0 313 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 PPIHO43447 177 aaKnown RBP12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 SFTA3P0C7M3 94 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 VSIG10L2P0DP72 767 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 LPAR6P43657 344 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 FAM209BQ5JX69 171 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 CST9LP1Q5W188 147 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 ADAMTS17Q8TE56 1095 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 RASL12Q9NYN1 266 aa12.23□□□□□ -0.45
SHROOM1-203ENST00000378679 LOC390937A0A1W2PQ73 354 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 TMEM210A6NLX4 147 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 C17orf112F2Z3M2 114 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 CA11O75493 328 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 ONECUT2O95948 504 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 CHATP28329 748 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 PMELP40967 661 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 TAS2R30P59541 319 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 SRSF6Q13247 344 aaKnown RBP12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 GABRA6Q16445 453 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 OR10S1Q8NGN2 331 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 MS4A5Q9H3V2 200 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 ZNF319Q9P2F9 582 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 hADV38S2A0JD32 116 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 PPP1R2P9O14990 202 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 TBC1D26Q86UD7 250 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 PUSL1Q8N0Z8 303 aaKnown RBP12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 MITD1Q8WV92 249 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 TMEM68Q96MH6 324 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 TAAR6Q96RI8 345 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 ALX4Q9H161 411 aaPredicted RBP12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 STRAPQ9Y3F4 350 aaKnown RBP12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 TRAV38-1A0A0B4J264 116 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 AQP7O14520 342 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 SCAF4O95104 1147 aaKnown RBP12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 RAB5CP51148 216 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 VAX1Q5SQQ9 334 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 GGNQ86UU5 652 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 AQP3Q92482 292 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 OR5B12Q96R08 314 aa12.22□□□□□ -0.45
SHROOM1-203ENST00000378679 NCOR2Q9Y618 2525 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms