RNA–Protein interactions for RNA: ENST00000377011.6

VRK3-202, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VRK3, Length 1,749 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-202ENST00000377011 PRKACAP17612 351 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 RBMXP38159 391 aaKnown RBP10.5□□□□□ -0.73
VRK3-202ENST00000377011 PJVKQ0ZLH3 352 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 VHLLQ6RSH7 139 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 ASCL4Q6XD76 172 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 DTX2Q86UW9 622 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 SEMA6DQ8NFY4 1073 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 PIGTQ969N2 578 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 ST6GALNAC5Q9BVH7 336 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 METTL9Q9H1A3 318 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 RGCCQ9H4X1 137 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 LPAR3Q9UBY5 353 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 IGHV2OR16-5A0A0B4J2B6 119 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 F8W036 122 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 ADAP1O75689 374 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 FAM157CP0CG43 387 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 FAHP16930 419 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 SERPINA2P20848 420 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 ANOS1P23352 680 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 BLOC1S1P78537 153 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 RSPO1Q2MKA7 263 aaPredicted RBP10.5□□□□□ -0.73
VRK3-202ENST00000377011 HFEQ30201 348 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 KRTAP27-1Q3LI81 207 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 LHFPL2Q6ZUX7 228 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 C1QL2Q7Z5L3 287 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 SGPP2Q8IWX5 399 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 PUSL1Q8N0Z8 303 aaKnown RBP10.5□□□□□ -0.73
VRK3-202ENST00000377011 LRRC18Q8N456 261 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 TMEM171Q8WVE6 324 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 SMIM8Q96KF7 97 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 Q96MF0 132 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 TECTBQ96PL2 329 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 OBP2BQ9NPH6 170 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 ZFP57Q9NU63 452 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 PLEK2Q9NYT0 353 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 IL36GQ9NZH8 169 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 MLXQ9UH92 298 aa10.5□□□□□ -0.73
VRK3-202ENST00000377011 CRYM-AS1A6NIL9 109 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 IFNA21P01568 189 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 SERPINA5P05154 406 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 PVALBP20472 110 aaPredicted RBP10.49□□□□□ -0.73
VRK3-202ENST00000377011 PMELP40967 661 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 FABP6P51161 128 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 RAB1AP62820 205 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 SMCO1Q147U7 214 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 LDLRAD3Q86YD5 345 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 ZCCHC24Q8N2G6 241 aaKnown RBP10.49□□□□□ -0.73
VRK3-202ENST00000377011 MAPK1IP1LQ8NDC0 245 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 OR10C1Q96KK4 312 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 PLEKHJ1Q9NW61 149 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 OR5AC2Q9NZP5 309 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 ANXA10Q9UJ72 324 aa10.49□□□□□ -0.73
VRK3-202ENST00000377011 PQLC2LA1A4F0 135 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 SGCEO43556 437 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 SYNGR3O43761 229 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 HTR3BO95264 441 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 CST4P01036 141 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 MMP7P09237 267 aaPredicted RBP10.48□□□□□ -0.73
VRK3-202ENST00000377011 CD99P14209 185 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 PAX1P15863 534 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 GLRA1P23415 457 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 CAV2P51636 162 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 ATP5J2P56134 94 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 RAB32Q13637 225 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 ADIPOQQ15848 244 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 TMEM42Q69YG0 159 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 LRRC75A-AS1Q8N1F1 130 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 MUC15Q8N387 334 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 CPEB3Q8NE35 698 aaKnown RBP10.48□□□□□ -0.73
VRK3-202ENST00000377011 OR5D18Q8NGL1 313 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 TMED6Q8WW62 240 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 SGK3Q96BR1 496 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 FBXO17Q96EF6 278 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 PLEKHA2Q9HB19 425 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 BIN3Q9NQY0 253 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 UQCC1Q9NVA1 299 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 NECAP2Q9NVZ3 263 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 CR1P17927 2039 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 CHD3Q12873 2000 aaKnown RBP10.48□□□□□ -0.73
VRK3-202ENST00000377011 CUBNO60494 3623 aa10.48□□□□□ -0.73
VRK3-202ENST00000377011 C5orf63A6NC05 138 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 OR6C6A6NF89 314 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 MSGN1A6NI15 193 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 GPR31O00270 319 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 SDCBPO00560 298 aaPredicted RBP10.47□□□□□ -0.73
VRK3-202ENST00000377011 JTBO76095 146 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 HOXB1P14653 301 aaPredicted RBP10.47□□□□□ -0.73
VRK3-202ENST00000377011 PCBD1P61457 104 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 RBM39Q14498 530 aaKnown RBP10.47□□□□□ -0.73
VRK3-202ENST00000377011 SWI5Q1ZZU3 235 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 DHRS11Q6UWP2 260 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 Q71RC1 249 aaPredicted RBP10.47□□□□□ -0.73
VRK3-202ENST00000377011 LRP11Q86VZ4 500 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 LRTM2Q8N967 370 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 OR1F12Q8NHA8 337 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 GALNT14Q96FL9 552 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 TREM1Q9NP99 234 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 FZR1Q9UM11 496 aa10.47□□□□□ -0.73
VRK3-202ENST00000377011 FN1P02751 2386 aaKnown RBP10.47□□□□□ -0.73
VRK3-202ENST00000377011 SONP18583 2426 aaKnown RBP10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms