RNA–Protein interactions for RNA: ENST00000376491.7

CLCN6-204, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 927 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-204ENST00000376491 GPR12P47775 334 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 GBX2P52951 348 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-204ENST00000376491 DGCR2P98153 550 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 MRPL28Q13084 256 aaKnown RBP11.73□□□□□ -0.53
CLCN6-204ENST00000376491 DEFB136Q30KP8 78 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 TEX38Q6PEX7 206 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 TGIF2LXQ8IUE1 241 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 IZUMO1Q8IYV9 350 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 CBR4Q8N4T8 237 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 LINC00311Q8N616 119 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 TMEM104Q8NE00 496 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 TFAP2CQ92754 450 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 ST6GALNAC6Q969X2 333 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 MYCBPQ99417 103 aaPredicted RBP11.73□□□□□ -0.53
CLCN6-204ENST00000376491 ABCG5Q9H222 651 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 IFT22Q9H7X7 185 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 DCLRE1BQ9H816 532 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 PLSCR3Q9NRY6 295 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 LIN7CQ9NUP9 197 aaKnown RBP11.73□□□□□ -0.53
CLCN6-204ENST00000376491 MRPS18AQ9NVS2 196 aaKnown RBP11.73□□□□□ -0.53
CLCN6-204ENST00000376491 ING4Q9UNL4 249 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 ST3GAL6Q9Y274 331 aa11.73□□□□□ -0.53
CLCN6-204ENST00000376491 NCBP2LA6PVI3 153 aaKnown RBP11.72□□□□□ -0.53
CLCN6-204ENST00000376491 ZNF736B4DX44 427 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-204ENST00000376491 AP4M1O00189 453 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 GEMIN2O14893 280 aaKnown RBP11.72□□□□□ -0.53
CLCN6-204ENST00000376491 MAGEB3O15480 346 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 OR7C1O76099 320 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-204ENST00000376491 LIMS3P0CW19 117 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 LIMS4P0CW20 117 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 GZMHP20718 246 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 RBM11P57052 281 aaKnown RBP11.72□□□□□ -0.53
CLCN6-204ENST00000376491 RAB40BQ12829 278 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 PNLIPRP3Q17RR3 467 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 NHLRC3Q5JS37 347 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 UNQ9370/PRO34162Q6UXP9 181 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 CCDC107Q8WV48 283 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 APH1BQ8WW43 257 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 ARL11Q969Q4 196 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 ORAI1Q96D31 301 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 CPNE2Q96FN4 548 aaPredicted RBP11.72□□□□□ -0.53
CLCN6-204ENST00000376491 FAM118AQ9NWS6 357 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 IL36GQ9NZH8 169 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 TENM3Q9P273 2699 aa11.72□□□□□ -0.53
CLCN6-204ENST00000376491 IGHV3-43A0A0B4J1X8 118 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 A0A1W2PP11 408 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 TMEM30CPA0ZSE6 113 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 DYNC1I1O14576 645 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 SLC31A2O15432 143 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 MPZL2O60487 215 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 IGHV3-43DP0DP04 118 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 LUMP51884 338 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-204ENST00000376491 RAB25P57735 213 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 OR52M1Q8NGK5 317 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 OR2T10Q8NGZ9 312 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 OR52N1Q8NH53 320 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 GPR148Q8TDV2 347 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 RTN4IP1Q8WWV3 396 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-204ENST00000376491 SLC29A1Q99808 456 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 METTL9Q9H1A3 318 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 GFOD1Q9NXC2 390 aa11.71□□□□□ -0.53
CLCN6-204ENST00000376491 LSM4Q9Y4Z0 139 aaKnown RBP11.71□□□□□ -0.53
CLCN6-204ENST00000376491 SIRT4Q9Y6E7 314 aaPredicted RBP11.71□□□□□ -0.53
CLCN6-204ENST00000376491 SDCBPO00560 298 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-204ENST00000376491 SERPINA2P20848 420 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 CD1BP29016 333 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 ZNF93P35789 620 aaPredicted RBP11.7□□□□□ -0.54
CLCN6-204ENST00000376491 CFHR3Q02985 330 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 DCTN2Q13561 401 aaKnown RBP11.7□□□□□ -0.54
CLCN6-204ENST00000376491 GPR50Q13585 617 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 KIR2DS1Q14954 304 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 KLHL22Q53GT1 634 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 DDI2Q5TDH0 399 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 OR2G6Q5TZ20 316 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 RNF152Q8N8N0 203 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 C8orf31Q8N9H6 132 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 TMEM106AQ96A25 262 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 Q96MT0 163 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 S1PR3Q99500 378 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 HSPB9Q9BQS6 159 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 TMEM138Q9NPI0 162 aa11.7□□□□□ -0.54
CLCN6-204ENST00000376491 ORC5O43913 435 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 RAMP3O60896 148 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 MT-ND4P03905 459 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 CSTBP04080 98 aaKnown RBP11.69□□□□□ -0.54
CLCN6-204ENST00000376491 CD2P06729 351 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 ELANEP08246 267 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 VHLP40337 213 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 CDX1P47902 265 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-204ENST00000376491 ZNF134P52741 427 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 F2RL1P55085 397 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 FOXE3Q13461 319 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 MPV17LQ2QL34 196 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 CXorf66Q5JRM2 361 aaPredicted RBP11.69□□□□□ -0.54
CLCN6-204ENST00000376491 NKAPLQ5M9Q1 402 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 ATAD3CQ5T2N8 411 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 RPL22L1Q6P5R6 122 aaKnown RBP11.69□□□□□ -0.54
CLCN6-204ENST00000376491 ZNF497Q6ZNH5 498 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 ZNF439Q8NDP4 499 aa11.69□□□□□ -0.54
CLCN6-204ENST00000376491 OR13C5Q8NGS8 318 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms