RNA–Protein interactions for RNA: ENST00000374490.7

HMGCL-203, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCL, Length 1,600 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-203ENST00000374490 MOB1BQ7L9L4 216 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 OR8G5Q8NG78 346 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 OR5D13Q8NGL4 314 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 OR8U1Q8NH10 309 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 SECTM1Q8WVN6 248 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 SMDT1Q9H4I9 107 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 SMCO4Q9NRQ5 59 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 MTCH1Q9NZJ7 389 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 ZDHHC8Q9ULC8 765 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 NCKAP5O14513 1909 aa11.92□□□□□ -0.5
HMGCL-203ENST00000374490 SLC22A20A6NK97 555 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 UMAD1C9J7I0 102 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 PRKACAP17612 351 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 VDAC1P21796 283 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 MDH2P40926 338 aaKnown RBP11.91□□□□□ -0.5
HMGCL-203ENST00000374490 BAXQ07812 192 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 GUK1Q16774 197 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 MIDNQ504T8 468 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 ATP1A1-AS1Q5TC04 95 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 MDS2Q8NDY4 140 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 HES7Q9BYE0 225 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 KLF2Q9Y5W3 355 aaPredicted RBP11.91□□□□□ -0.5
HMGCL-203ENST00000374490 PTPRQQ9UMZ3 2332 aa11.91□□□□□ -0.5
HMGCL-203ENST00000374490 NPIPB11E5RHQ5 1161 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 J3QT63 122 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 AGPAT2O15120 278 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 DEGS1O15121 323 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 HSPA12AO43301 675 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 PRH1P02810 166 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 SCTP09683 121 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 SLC25A6P12236 298 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 CD46P15529 392 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 HLA-DRB3P79483 266 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 ZNF616Q08AN1 781 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 CLN3Q13286 438 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 SLC10A1Q14973 349 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 AVPI1Q5T686 147 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 ZNF880Q6PDB4 577 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 ZNF818PQ6ZRF7 136 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 GAPTQ8N292 157 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 C15orf54Q8N8G6 183 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 SUMF2Q8NBJ7 301 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 OR1K1Q8NGR3 316 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 MRPL30Q8TCC3 161 aaKnown RBP11.9□□□□□ -0.5
HMGCL-203ENST00000374490 BSCL2Q96G97 398 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-203ENST00000374490 USB1Q9BQ65 265 aaKnown RBP11.9□□□□□ -0.5
HMGCL-203ENST00000374490 CABLES2Q9BTV7 478 aa11.9□□□□□ -0.5
HMGCL-203ENST00000374490 ADAT1Q9BUB4 502 aaKnown RBP11.9□□□□□ -0.5
HMGCL-203ENST00000374490 LYRM2Q9NU23 88 aaPredicted RBP11.9□□□□□ -0.5
HMGCL-203ENST00000374490 BTBD17A6NE02 478 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 FOLR2P14207 255 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 HERPUD1Q15011 391 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 OR8G1Q15617 311 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 NMSQ5H8A3 153 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 Q8IYB0 196 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 FAM58AQ8N1B3 248 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 BIN3Q9NQY0 253 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 PLA2G3Q9NZ20 509 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 CRIM1Q9NZV1 1036 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 ZNF175Q9Y473 711 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 GCN1Q92616 2671 aaKnown RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 TNRC6AQ8NDV7 1962 aaKnown RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 ZNF503-AS2A6NEH8 195 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 K7ENP7 123 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 K7N7A8 449 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 NGFP01138 241 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 GLI4P10075 376 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 CCL2P13500 99 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 LMO1P25800 156 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 FOXG1P55316 489 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 ID3Q02535 119 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 NHLH2Q02577 135 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 LY6DQ14210 128 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 FBXW9Q5XUX1 488 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 INO80CQ6PI98 192 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 NUFIP2Q7Z417 695 aaKnown RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 BATF2Q8N1L9 274 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 ZFP62Q8NB50 900 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 BCL2L2Q92843 193 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 GNPNAT1Q96EK6 184 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 RTL8AQ9BWD3 113 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 ZNF552Q9H707 407 aaPredicted RBP11.89□□□□□ -0.51
HMGCL-203ENST00000374490 TREM2Q9NZC2 230 aa11.89□□□□□ -0.51
HMGCL-203ENST00000374490 IGSF23A1L1A6 192 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 WRBO00258 174 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 ADAM20O43506 726 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 SYNGR1O43759 233 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 F12P00748 615 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-203ENST00000374490 PPT1P50897 306 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 RAB13P51153 203 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 MRPL49Q13405 166 aaKnown RBP11.88□□□□□ -0.51
HMGCL-203ENST00000374490 TBC1D28Q2M2D7 210 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 SHEQ5VZ18 495 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 CLEC9AQ6UXN8 241 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 H1FOOQ8IZA3 346 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-203ENST00000374490 TMEM252Q8N6L7 170 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 HSD17B11Q8NBQ5 300 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 LILRB1Q8NHL6 650 aaPredicted RBP11.88□□□□□ -0.51
HMGCL-203ENST00000374490 WNT2BQ93097 391 aa11.88□□□□□ -0.51
HMGCL-203ENST00000374490 AKR1E2Q96JD6 320 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 59.8 ms