RNA–Protein interactions for RNA: ENST00000373997.7

A1CF-204, Transcript of APOBEC1 complementation factor, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene A1CF, Length 2,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
A1CF-204ENST00000373997 GLP1RP43220 463 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 TDGF1P3P51864 188 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 SRPXP78539 464 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 ZNF616Q08AN1 781 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 GABRA6Q16445 453 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 SP6Q3SY56 376 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 COLCA1Q6ZS62 124 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 LYZL2Q7Z4W2 148 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 DPPA2Q7Z7J5 298 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 MYPOPQ86VE0 399 aaPredicted RBP11.33□□□□□ -0.6
A1CF-204ENST00000373997 OSR2Q8N2R0 312 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 ZNF610Q8N9Z0 462 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 MSI2Q96DH6 328 aaKnown RBP11.33□□□□□ -0.6
A1CF-204ENST00000373997 STARD4Q96DR4 205 aa11.33□□□□□ -0.6
A1CF-204ENST00000373997 IGKV1-27A0A075B6S5 117 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 C7orf77A4D0Y5 90 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 NGFP01138 241 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 SMIM6P0DI80 62 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 COX5AP20674 150 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 IDH3GP51553 393 aaPredicted RBP11.32□□□□□ -0.6
A1CF-204ENST00000373997 RHEBQ15382 184 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 AWAT1Q58HT5 328 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 FBXW12Q6X9E4 464 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 CXorf67Q86X51 503 aaPredicted RBP11.32□□□□□ -0.6
A1CF-204ENST00000373997 OR10AD1Q8NGE0 317 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 APOBEC3DQ96AK3 386 aaPredicted RBP11.32□□□□□ -0.6
A1CF-204ENST00000373997 TECTBQ96PL2 329 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 SMDT1Q9H4I9 107 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 WFDC1Q9HC57 220 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 TLN1Q9Y490 2541 aaKnown RBP11.32□□□□□ -0.6
A1CF-204ENST00000373997 C5orf52A6NGY3 159 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 A6NJY4 79 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 EIF3GO75821 320 aaKnown RBP eCLIP11.32□□□□□ -0.6
A1CF-204ENST00000373997 CNOT4O95628 575 aaKnown RBP11.32□□□□□ -0.6
A1CF-204ENST00000373997 DIRAS3O95661 229 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 NRASP01111 189 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 AGAP20933 346 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 HOXC12P31275 282 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 FXYD4P59646 89 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 TMEM211Q6ICI0 200 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 SLC22A25Q6T423 547 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 MRPL21Q7Z2W9 205 aaKnown RBP11.32□□□□□ -0.6
A1CF-204ENST00000373997 FAM185AQ8N0U4 392 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 HPSE2Q8WWQ2 592 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 BSCL2Q96G97 398 aaPredicted RBP11.32□□□□□ -0.6
A1CF-204ENST00000373997 RSRP1Q9BUV0 290 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 PLSCR4Q9NRQ2 329 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 SLC7A11Q9UPY5 501 aa11.32□□□□□ -0.6
A1CF-204ENST00000373997 CHD8Q9HCK8 2581 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 NCOR2Q9Y618 2525 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 UBE2CO00762 179 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 PDCD6O75340 191 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 CDS2O95674 445 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 PRH1P02810 166 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 S100A6P06703 90 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 WNT5AP41221 380 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 FUT6P51993 359 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 HERV-K104P61576 105 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 SNRPEP62304 92 aaKnown RBP11.31□□□□□ -0.6
A1CF-204ENST00000373997 MALLQ13021 153 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 GNMTQ14749 295 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 TMEM95Q3KNT9 176 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 PHLDA2Q53GA4 152 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 GFRALQ6UXV0 394 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 OR56B2PQ8NGI1 322 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 OR4D5Q8NGN0 318 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 PIGCQ92535 297 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 SPSB4Q96A44 273 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 MARS2Q96GW9 593 aaKnown RBP11.31□□□□□ -0.6
A1CF-204ENST00000373997 EIF5A2Q9GZV4 153 aaKnown RBP11.31□□□□□ -0.6
A1CF-204ENST00000373997 SPACA1Q9HBV2 294 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 SH3BGRL2Q9UJC5 107 aa11.31□□□□□ -0.6
A1CF-204ENST00000373997 GEMIN2O14893 280 aaKnown RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 AGFG2O95081 481 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 CGAP01215 116 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 SNRNP70P08621 437 aaKnown RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 ACAA1P09110 424 aaPredicted RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 ZNF14P17017 642 aaPredicted RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 TBC1D28Q2M2D7 210 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 EIF2S3LQ2VIR3 472 aaKnown RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 AKIRIN2Q53H80 203 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 ETV3LQ6ZN32 361 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 FBXL14Q8N1E6 418 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 OR5L1Q8NGL2 311 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 OR1J1Q8NGS3 322 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 SNRNP40Q96DI7 357 aaKnown RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 TCEAL7Q9BRU2 100 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 PARP12Q9H0J9 701 aaKnown RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 SLC35B3Q9H1N7 401 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 ZDHHC8Q9ULC8 765 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 IGKV1-12A0A0C4DH73 117 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 ZNF816-ZNF321PA0A0X1KG74 233 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 PHF1O43189 567 aaPredicted RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 IGKV1D-12P01611 117 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 S100A9P06702 114 aaKnown RBP11.3□□□□□ -0.6
A1CF-204ENST00000373997 ZNF44P15621 663 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 PIGYQ3MUY2 71 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 SPATA46Q5T0L3 261 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 PLCXD3Q63HM9 321 aa11.3□□□□□ -0.6
A1CF-204ENST00000373997 OR8G5Q8NG78 346 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms