RNA–Protein interactions for RNA: ENST00000373720.3

SNRNP40-202, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 1 (best) BASIC

Gene SNRNP40, Length 1,087 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-202ENST00000373720 HKR1P10072 659 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 GATA4P43694 442 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 FOXG1P55316 489 aaPredicted RBP7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 HTD2P86397 168 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 ID3Q02535 119 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 RBPJQ06330 500 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 ZNF154Q13106 437 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 CATR1Q13166 79 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 CR1LQ2VPA4 569 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 ZNF324BQ6AW86 544 aaPredicted RBP7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 ZNF585AQ6P3V2 769 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 PCSK4Q6UW60 755 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 DPPA3Q6W0C5 159 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 C9orf106Q8NAJ2 232 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 LFNGQ8NES3 379 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 OR10V1Q8NGI7 309 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 OR4D5Q8NGN0 318 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 EDARADDQ8WWZ3 215 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 NINJ1Q92982 152 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 GNPNAT1Q96EK6 184 aaPredicted RBP7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 SMIM8Q96KF7 97 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 REG4Q9BYZ8 158 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 TAF9BQ9HBM6 251 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 PARP11Q9NR21 331 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 MMP26Q9NRE1 261 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 TAS2R3Q9NYW6 316 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 LPAR3Q9UBY5 353 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 TRAPPC2LQ9UL33 140 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 ZDHHC8Q9ULC8 765 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 WASF3Q9UPY6 502 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 GAB2Q9UQC2 676 aa7.4□□□□□ -1.22
SNRNP40-202ENST00000373720 IGHV2OR16-5A0A0B4J2B6 119 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 FAM90A9PA6NNJ1 464 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 H0YIZ8 118 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 SLC33A1O00400 549 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 TOR1AO14656 332 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 SYNGR1O43759 233 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 TIMM8AO60220 97 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 MED6O75586 246 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 LYZL6O75951 148 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 DFFBO76075 338 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 CRYZL1O95825 349 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 OR2H2O95918 312 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 CCL2P13500 99 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 TNFSF4P23510 183 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 PTAFRP25105 342 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 NKX2-1P43699 371 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 SULT1A2P50226 295 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 F2RL1P55085 397 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 FXYD4P59646 89 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 DAZAP2Q15038 168 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 C3AR1Q16581 482 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 TMEM268Q5VZI3 342 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 ZNF66Q6ZN08 573 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 TBC1D26Q86UD7 250 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 KDF1Q8NAX2 398 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 NUP37Q8NFH4 326 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 MAFIPQ8WZ33 124 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 HDHD3Q9BSH5 251 aaPredicted RBP7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 CYTL1Q9NRR1 136 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 LUZP4Q9P127 313 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 CACNA1HO95180 2353 aa7.39□□□□□ -1.23
SNRNP40-202ENST00000373720 IGLV3-9A0A075B6K5 115 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 CDIPTO14735 213 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 KLK10O43240 276 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 SPINT2O43291 252 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 NDUFS6O75380 124 aaKnown RBP7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 PGLYRP1O75594 196 aaPredicted RBP7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 HAND1O96004 215 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 SCTP09683 121 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 CECR9P0C854 216 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 PI3P19957 117 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 S100A10P60903 97 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 RAB2AP61019 212 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 RPL23AP62750 156 aaKnown RBP7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 VAMP2P63027 116 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 PMP22Q01453 160 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 SWI5Q1ZZU3 235 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 IGSF11Q5DX21 431 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 NMSQ5H8A3 153 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 ACP7Q6ZNF0 438 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 CXorf67Q86X51 503 aaPredicted RBP7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 GCNT2Q8N0V5 402 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 ZNF610Q8N9Z0 462 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 LYPD6BQ8NI32 183 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 SNX22Q96L94 193 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 GINS3Q9BRX5 216 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 PARD6GQ9BYG4 376 aaPredicted RBP7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 FGF23Q9GZV9 251 aaPredicted RBP7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 FAM234AQ9H0X4 552 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 LIME1Q9H400 295 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 BARX1Q9HBU1 254 aaPredicted RBP7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 IL19Q9UHD0 177 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 WSB1Q9Y6I7 421 aa7.38□□□□□ -1.23
SNRNP40-202ENST00000373720 MED12Q93074 2177 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 PTPRBP23467 1997 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 ARHGAP21Q5T5U3 1957 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 IGHV1-18A0A0C4DH31 117 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 A8MXE2 369 aa7.37□□□□□ -1.23
SNRNP40-202ENST00000373720 SRRM5B3KS81 715 aa7.37□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms