RNA–Protein interactions for RNA: ENST00000368287.1

ECHDC1-201, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2

Gene ECHDC1, Length 509 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-201ENST00000368287 URGCP-MRPS24S4R325 110 aa1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 ZNF638Q14966 1978 aaKnown RBP1.47□□□□□ -2.17
ECHDC1-201ENST00000368287 TRPM3Q9HCF6 1732 aaPredicted RBP1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 TRBV24-1A0A075B6N3 115 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 SULT1C2O00338 296 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 NDUFS6O75380 124 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 FADS2O95864 444 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 DEFA6Q01524 100 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 MMDQ15546 238 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 ZCWPW2Q504Y3 356 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 C10orf91Q5T1B1 145 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 XKRXQ6PP77 449 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 TMPPEQ6ZT21 453 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 LYZL2Q7Z4W2 148 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 MRPL52Q86TS9 123 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 FER1L6-AS1Q8NA97 138 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 ZNRF2Q8NHG8 242 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 SUN5Q8TC36 379 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 RNASEH2CQ8TDP1 164 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 CASTOR1Q8WTX7 329 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 CCDC127Q96BQ5 260 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 FAM210AQ96ND0 272 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 OR8B2Q96RD0 313 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 STACQ99469 402 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 ARL6Q9H0F7 186 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 RPUSD1Q9UJJ7 312 aaKnown RBP1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 CRB1P82279 1406 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 RAB3GAP2Q9H2M9 1393 aa1.46□□□□□ -2.18
ECHDC1-201ENST00000368287 CHD2O14647 1828 aaKnown RBP1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 ATAD5Q96QE3 1844 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 GOLGA8IPA6NC78 632 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 ARGFXA6NJG6 315 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 SMLR1H3BR10 107 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 GPR171O14626 319 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 YKT6O15498 198 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 SH2D1AO60880 128 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 CDS2O95674 445 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 SNAP29O95721 258 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 LTAP01374 205 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 LIMS3P0CW19 117 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 LIMS4P0CW20 117 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 RD3LP0DJH9 198 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 OR12D1P0DN82 309 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 UGT2B10P36537 528 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 CBX5P45973 191 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 PSMD7P51665 324 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 FOXF1Q12946 379 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 APOFQ13790 326 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 OR4D1Q15615 310 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 NIPAL1Q6NVV3 410 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 NOXRED1Q6NXP6 359 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 MUC15Q8N387 334 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 OR11L1Q8NGX0 322 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 RORBQ92753 470 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 CLDN23Q96B33 292 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 DDIT4LQ96D03 193 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 TMEM56Q96MV1 263 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 CYTH2Q99418 400 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 ACBD6Q9BR61 282 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 SLC19A3Q9BZV2 496 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 ZNF286AQ9HBT8 521 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 KCNIP2Q9NS61 270 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 MS4A12Q9NXJ0 267 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 NAGKQ9UJ70 344 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 MYO5BQ9ULV0 1848 aa1.45□□□□□ -2.18
ECHDC1-201ENST00000368287 FBN1P35555 2871 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 PTPRKQ15262 1439 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 ERICH4A6NGS2 130 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 EEF1E1O43324 174 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 ZNF73O43830 326 aaPredicted RBP1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 MPZL2O60487 215 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 DEDDO75618 318 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 SOX14O95416 240 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 OPN1SWP03999 348 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 GYPCP04921 128 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 PSMB9P28065 219 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 C1QTNF8P60827 252 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 TCF24Q7RTU0 167 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 ACBD4Q8NC06 268 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 OR9I1Q8NGQ6 314 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 HIGD2AQ9BW72 106 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 BBS2Q9BXC9 721 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 METTL8Q9H825 291 aaKnown RBP1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 FBXL3Q9UKT7 428 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 MYO9BQ13459 2157 aa1.44□□□□□ -2.18
ECHDC1-201ENST00000368287 OTOFQ9HC10 1997 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 C17orf51A8MQB3 221 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 SLC31A1O15431 190 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 CRXO43186 299 aaPredicted RBP1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 PSCAO43653 123 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 CDK14O94921 469 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 ASS1P00966 412 aaKnown RBP1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 NPPAP01160 153 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 GUSBP08236 651 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 PSKH1P11801 424 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 FUSP35637 526 aaKnown RBP eCLIP1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 HSPA13P48723 471 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 EBLN2Q6P2I7 272 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 Q6ZRU5 148 aa1.43□□□□□ -2.18
ECHDC1-201ENST00000368287 BOD1L2Q8IYS8 172 aa1.43□□□□□ -2.18
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms