RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 PLPPR5Q32ZL2 321 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 DNLZQ5SXM8 178 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 NRG4Q8WWG1 115 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 RNF2Q99496 336 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 NAA50Q9GZZ1 169 aaKnown RBP6.26□□□□□ -1.41
SPTA1-201ENST00000368147 TMEM38AQ9H6F2 299 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 IGSF23A1L1A6 192 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 SCG5P05408 212 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 TFAP2AP05549 437 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 FCGR3AP08637 254 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 CCL3P10147 92 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ACP1P24666 158 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 NUBP1P53384 320 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 UCNP55089 124 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 SSBP1Q04837 148 aaKnown RBP6.26□□□□□ -1.41
SPTA1-201ENST00000368147 IL36GQ9NZH8 169 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 FAM74A7A6NL05 159 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ID1P41134 155 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ZFP36L2P47974 494 aaKnown RBP6.26□□□□□ -1.41
SPTA1-201ENST00000368147 TWIST1Q15672 202 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 EMC4Q5J8M3 183 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 TMEM88Q6PEY1 159 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 MAVSQ7Z434 540 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 OR2K2Q8NGT1 345 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 ANAPC13Q9BS18 74 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 DPH3P1Q9H4G8 78 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 RASL12Q9NYN1 266 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 IL20Q9NYY1 176 aa6.26□□□□□ -1.41
SPTA1-201ENST00000368147 CLEC18AA5D8T8 446 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PPP1R17O96001 155 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PMCHL1Q16048 86 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 NKG7Q16617 165 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 SP6Q3SY56 376 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 CLEC18CQ8NCF0 446 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 C1QTNF3Q9BXJ4 246 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 SLC35B3Q9H1N7 401 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PARP11Q9NR21 331 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 SIRT5Q9NXA8 310 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 TRAV38-1A0A0B4J264 116 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 A0A0B4J293 547 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 FAM181BA6NEQ2 426 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 H7C2G1 150 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 ALPLP05186 524 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 ACAA1P09110 424 aaPredicted RBP6.25□□□□□ -1.41
SPTA1-201ENST00000368147 LIMS3P0CW19 117 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 LIMS4P0CW20 117 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PGA4P0DJD7 388 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PGA5P0DJD9 388 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 DDOSTP39656 456 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 UBE2L3P68036 154 aaKnown RBP6.25□□□□□ -1.41
SPTA1-201ENST00000368147 AQP6Q13520 282 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 Q5PR19 223 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 LINC00299Q6ZSB3 139 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 LINC01560Q8TB33 94 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 SLC35B4Q969S0 331 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 TMEM56Q96MV1 263 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 P2RX4Q99571 388 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 IL17BQ9UHF5 180 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 SLC45A2Q9UMX9 530 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 CACNA1IQ9P0X4 2223 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 MAP1LC3B2A6NCE7 125 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 C16orf97H3BN30 126 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 ZNF354AO60765 605 aaPredicted RBP6.25□□□□□ -1.41
SPTA1-201ENST00000368147 CA1P00915 261 aaPredicted RBP6.25□□□□□ -1.41
SPTA1-201ENST00000368147 GUCA2AQ02747 115 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 MEF2CQ06413 473 aaPredicted RBP6.25□□□□□ -1.41
SPTA1-201ENST00000368147 MRGPREQ86SM8 312 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 LINC01465Q8N7H1 131 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 MAP1LC3BQ9GZQ8 125 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 COL18A1P39060 1754 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 EDIL3O43854 480 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 CDS2O95674 445 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 CT62P0C5K7 136 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 ST3GAL2Q16842 350 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 RBKSQ9H477 322 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PSME4Q14997 1843 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 HRKO00198 91 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 EGR3Q06889 387 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 TMEM37Q8WXS4 190 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 CACNG5Q9UF02 275 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 ERRFI1Q9UJM3 462 aaPredicted RBP6.25□□□□□ -1.41
SPTA1-201ENST00000368147 COL22A1Q8NFW1 1626 aaPredicted RBP6.25□□□□□ -1.41
SPTA1-201ENST00000368147 TCRBV3S1A0A5B6 114 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 HIST1H1EP10412 219 aaKnown RBP6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PTGFRP43088 359 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 GNG3P63215 75 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 CCL8P80075 99 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 RRN3P1Q2M238 152 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PRICKLE4Q2TBC4 344 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 KCNK17Q96T54 332 aa6.25□□□□□ -1.41
SPTA1-201ENST00000368147 PATJQ8NI35 1801 aa6.24□□□□□ -1.41
SPTA1-201ENST00000368147 ZNF236Q9UL36 1845 aa6.24□□□□□ -1.41
SPTA1-201ENST00000368147 TCRBP04435 133 aa6.24□□□□□ -1.41
SPTA1-201ENST00000368147 COMPP49747 757 aaPredicted RBP6.24□□□□□ -1.41
SPTA1-201ENST00000368147 FNDC7Q5VTL7 733 aa6.24□□□□□ -1.41
SPTA1-201ENST00000368147 OR52N1Q8NH53 320 aa6.24□□□□□ -1.41
SPTA1-201ENST00000368147 OR52I2Q8NH67 350 aa6.24□□□□□ -1.41
SPTA1-201ENST00000368147 DOK1Q99704 481 aa6.24□□□□□ -1.41
SPTA1-201ENST00000368147 ANGPTL4Q9BY76 406 aa6.24□□□□□ -1.41
SPTA1-201ENST00000368147 DUSP15Q9H1R2 295 aaPredicted RBP6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms