RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 PNPP00491 289 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 HSBP1O75506 76 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 ACER2Q5QJU3 275 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 OR5D13Q8NGL4 314 aa10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 NOL4LQ96MY1 436 aaPredicted RBP10.34□□□□□ -0.75
CDC42BPA-202ENST00000366764 DANCRP0C864 163 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 MOB3AQ96BX8 217 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 LOC390937A0A1W2PQ73 354 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 J3QRE1 110 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 RIPPLY2Q5TAB7 128 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 TSPO2Q5TGU0 170 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 SLC16A13Q7RTY0 426 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 C5orf66Q9H5L9 145 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 FBLN5Q9UBX5 448 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 FAM90A26D6RGX4 464 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 LIFP15018 202 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 SFTPA1Q8IWL2 248 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 TDHQ8IZJ6 230 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 TMEM56Q96MV1 263 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 NTF3P20783 257 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 SRP14P37108 136 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 PMP22Q01453 160 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 GAPTQ8N292 157 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 WDR87Q6ZQQ6 2873 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 MPDU1O75352 247 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 ARG1P05089 322 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 TMEM50BP56557 158 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 ACY3Q96HD9 319 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 NKX2-6A6NCS4 301 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 OOEPA6NGQ2 149 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 RD3LP0DJH9 198 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 MPZP25189 248 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 LPAR5Q9H1C0 372 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 TUBD1Q9UJT1 453 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 COX7A2P2O60397 106 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 TNFRSF1AP19438 455 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 MEF2BQ02080 365 aaPredicted RBP10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 LYZL2Q7Z4W2 148 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 TRIB1Q96RU8 372 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 SHISA8B8ZZ34 492 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 NPIPB9F8W1W9 429 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 RPL36A-HNRNPH2H7BZ11 118 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 FCGR3AP08637 254 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 HNRNPA3P51991 378 aaKnown RBP10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 HLA-BQ31612 363 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 OR6C3Q9NZP0 311 aa10.33□□□□□ -0.76
CDC42BPA-202ENST00000366764 ZNF468Q5VIY5 522 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 LDLRAD3Q86YD5 345 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 FAM206AQ9NX38 181 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 RPS11P62280 158 aaKnown RBP eCLIP10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 MGAT2Q10469 447 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 KIAA1549LQ6ZVL6 1849 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 PLXNB1O43157 2135 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 ATP6V0CP27449 155 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 SAXO1Q8IYX7 474 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 ADIPOR1Q96A54 375 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 FCN1O00602 326 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 CELA2BP08218 269 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 NAT8BQ9UHF3 227 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 SHISA3A0PJX4 238 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 C4orf51C9J302 202 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 J3QT63 122 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 ZNF816Q0VGE8 651 aaPredicted RBP10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 BATF2Q8N1L9 274 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 CYB561D1Q8N8Q1 229 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 LINC00114Q6XXX2 140 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 TLNRD1Q9H1K6 362 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 SLC25A22Q9H936 323 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 C17orf78Q8N4C9 275 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 RAB24Q969Q5 203 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 NDFIP1Q9BT67 221 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 SEMA7AO75326 666 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 UCP3P55916 312 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 ZP1P60852 638 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 EFNB1P98172 346 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 ZNF154Q13106 437 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 OR1C1Q15619 314 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 Q5BKY6 102 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 OR2B11Q5JQS5 317 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 ETV3LQ6ZN32 361 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 IGKV1D-42A0A075B6H8 117 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 TMEM229AB2RXF0 380 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 GABRA6Q16445 453 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 NHLRC2Q8NBF2 726 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 OR10G8Q8NGN5 311 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 ISOC2Q96AB3 205 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 USB1Q9BQ65 265 aaKnown RBP10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 OR2D2Q9H210 308 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 PARD6AQ9NPB6 346 aa10.32□□□□□ -0.76
CDC42BPA-202ENST00000366764 ENSAO43768 121 aaKnown RBP10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 BTCP35070 178 aa10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 LINC01565O15544 149 aa10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 FOXQ1Q9C009 403 aa10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 DVL1O14640 695 aa10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 CYB5R3P00387 301 aaPredicted RBP10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 FAM157BP0CG42 384 aa10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 KRTDAPP60985 99 aa10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 SLC24A4Q8NFF2 622 aa10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 PIPOXQ9P0Z9 390 aa10.31□□□□□ -0.76
CDC42BPA-202ENST00000366764 TMEM14DPA8MWL7 114 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms