RNA–Protein interactions for RNA: ENST00000361309.5

CD47-202, Transcript of CD47 molecule, humanhuman

TSL 1 (best) BASIC

Gene CD47, Length 1,285 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-202ENST00000361309 HSPB9Q9BQS6 159 aa16.5■□□□□ 0.23
CD47-202ENST00000361309 FAM192AQ9GZU8 254 aa16.5■□□□□ 0.23
CD47-202ENST00000361309 DHDHQ9UQ10 334 aa16.5■□□□□ 0.23
CD47-202ENST00000361309 EXOGQ9Y2C4 368 aaKnown RBP16.5■□□□□ 0.23
CD47-202ENST00000361309 ZNF256Q9Y2P7 627 aaPredicted RBP16.5■□□□□ 0.23
CD47-202ENST00000361309 SIRT4Q9Y6E7 314 aaPredicted RBP16.5■□□□□ 0.23
CD47-202ENST00000361309 SAC3D1A6NKF1 404 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 HTR3BO95264 441 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 MOSP00540 346 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 IGHG4P01861 327 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 GZMHP20718 246 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 CHATP28329 748 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 CD1BP29016 333 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 CFHR3Q02985 330 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 FHL3Q13643 280 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 SLC25A30Q5SVS4 291 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 FAM53AQ6NSI3 398 aaPredicted RBP16.49■□□□□ 0.23
CD47-202ENST00000361309 LINC00311Q8N616 119 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 TMEM104Q8NE00 496 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 Q8NFD4 153 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 OR51A2Q8NGJ7 313 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 TSEN15Q8WW01 171 aaKnown RBP16.49■□□□□ 0.23
CD47-202ENST00000361309 RTN4IP1Q8WWV3 396 aaPredicted RBP16.49■□□□□ 0.23
CD47-202ENST00000361309 RBMXL1Q96E39 390 aaKnown RBP16.49■□□□□ 0.23
CD47-202ENST00000361309 CPNE2Q96FN4 548 aaPredicted RBP16.49■□□□□ 0.23
CD47-202ENST00000361309 MRPL48Q96GC5 212 aaKnown RBP16.49■□□□□ 0.23
CD47-202ENST00000361309 PDCD1LG2Q9BQ51 273 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 ALG8Q9BVK2 526 aa16.49■□□□□ 0.23
CD47-202ENST00000361309 ISG20L2Q9H9L3 353 aaKnown RBP16.49■□□□□ 0.23
CD47-202ENST00000361309 TMEM212A6NML5 194 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 ZNF736B4DX44 427 aaPredicted RBP16.48■□□□□ 0.23
CD47-202ENST00000361309 C15orf65H3BRN8 121 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 SDCBPO00560 298 aaPredicted RBP16.48■□□□□ 0.23
CD47-202ENST00000361309 MAGEB3O15480 346 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 RAB3AP20336 220 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 VDAC1P21796 283 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 SNRPGP62308 76 aaKnown RBP16.48■□□□□ 0.23
CD47-202ENST00000361309 GALEQ14376 348 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 MEDAGQ5VYS4 303 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 OR11H1Q8NG94 326 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 OR52M1Q8NGK5 317 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 OR5AK2Q8NH90 309 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 MUC7Q8TAX7 377 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 ARL11Q969Q4 196 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 ST6GALNAC6Q969X2 333 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 LGALS12Q96DT0 336 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 CENPNQ96H22 339 aaPredicted RBP16.48■□□□□ 0.23
CD47-202ENST00000361309 AASSQ9UDR5 926 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 ST3GAL6Q9Y274 331 aa16.48■□□□□ 0.23
CD47-202ENST00000361309 SACSQ9NZJ4 4579 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 IGHV3-43A0A0B4J1X8 118 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 E9PI62 339 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 OR7C1O76099 320 aaPredicted RBP16.47■□□□□ 0.23
CD47-202ENST00000361309 LY86O95711 162 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 RPSAP08865 295 aaKnown RBP16.47■□□□□ 0.23
CD47-202ENST00000361309 IGHV3-43DP0DP04 118 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 PSMB8P28062 276 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 F2RL1P55085 397 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 CASC10Q5T4H9 136 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 ZNF529Q6P280 563 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 ASCL4Q6XD76 172 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 FAM71E2Q8N5Q1 922 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 CCDC107Q8WV48 283 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 GFOD1Q9NXC2 390 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 SMAD5-AS1Q9Y6J3 95 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 RYR2Q92736 4967 aa16.47■□□□□ 0.23
CD47-202ENST00000361309 TMEM30CPA0ZSE6 113 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 CDRT1O95170 752 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 IL3RAP26951 378 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 SOX6P35712 828 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 SYS1Q8N2H4 156 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 C8orf31Q8N9H6 132 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 OR8H1Q8NGG4 311 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 KCTD7Q96MP8 289 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 IFT22Q9H7X7 185 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 TAS2R4Q9NYW5 299 aa16.46■□□□□ 0.23
CD47-202ENST00000361309 SLC31A2O15432 143 aa16.45■□□□□ 0.22
CD47-202ENST00000361309 SOX2P48431 317 aa16.45■□□□□ 0.22
CD47-202ENST00000361309 RBM11P57052 281 aaKnown RBP16.45■□□□□ 0.22
CD47-202ENST00000361309 C1orf146Q5VVC0 180 aa16.45■□□□□ 0.22
CD47-202ENST00000361309 OR52N1Q8NH53 320 aa16.45■□□□□ 0.22
CD47-202ENST00000361309 MYCBPQ99417 103 aaPredicted RBP16.45■□□□□ 0.22
CD47-202ENST00000361309 ING4Q9UNL4 249 aa16.45■□□□□ 0.22
CD47-202ENST00000361309 SNTNA6NMZ2 147 aa16.44■□□□□ 0.22
CD47-202ENST00000361309 GEMIN2O14893 280 aaKnown RBP16.44■□□□□ 0.22
CD47-202ENST00000361309 IGF1P05019 195 aa16.44■□□□□ 0.22
CD47-202ENST00000361309 ZIK1Q3SY52 487 aaPredicted RBP16.44■□□□□ 0.22
CD47-202ENST00000361309 NHLRC3Q5JS37 347 aa16.44■□□□□ 0.22
CD47-202ENST00000361309 SBSPONQ8IVN8 264 aa16.44■□□□□ 0.22
CD47-202ENST00000361309 MYOZ3Q8TDC0 251 aa16.44■□□□□ 0.22
CD47-202ENST00000361309 RCHY1Q96PM5 261 aa16.44■□□□□ 0.22
CD47-202ENST00000361309 METTL9Q9H1A3 318 aa16.44■□□□□ 0.22
CD47-202ENST00000361309 ORC5O43913 435 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 INSL3P51460 131 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 MRPL28Q13084 256 aaKnown RBP16.43■□□□□ 0.22
CD47-202ENST00000361309 ATAD3CQ5T2N8 411 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 ASPHD1Q5U4P2 390 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 OR1N2Q8NGR9 330 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 JAM3Q9BX67 310 aa16.43■□□□□ 0.22
CD47-202ENST00000361309 KLK15Q9H2R5 256 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms