RNA–Protein interactions for RNA: ENST00000360642.7

CLCN3-202, Transcript of chloride voltage-gated channel 3, humanhuman

TSL 2 BASIC

Gene CLCN3, Length 3,208 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN3-202ENST00000360642 GAPDHP04406 335 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 CLDN18P56856 261 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 EIF5AP63241 154 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PJVKQ0ZLH3 352 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF169Q14929 603 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PLCXD3Q63HM9 321 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PUSL1Q8N0Z8 303 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 SVBPQ8N300 66 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 RTN4IP1Q8WWV3 396 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 MOB3AQ96BX8 217 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 MSI2Q96DH6 328 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 THOC3Q96J01 351 aaKnown RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 PRRX2Q99811 253 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF703Q9H7S9 590 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 OR2S2Q9NQN1 319 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF629Q9UEG4 869 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 BOKQ9UMX3 212 aaPredicted RBP6.23□□□□□ -1.41
CLCN3-202ENST00000360642 KCNIP3Q9Y2W7 256 aa6.23□□□□□ -1.41
CLCN3-202ENST00000360642 H7C1Q1 480 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 K7EPK0 472 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 GPR31O00270 319 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FARS2O95363 451 aaKnown RBP6.22□□□□□ -1.41
CLCN3-202ENST00000360642 OR5AC1P0C628 307 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FCGR2CP31995 323 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 SULT1A2P50226 295 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FAM122CQ6P4D5 195 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FAM185AQ8N0U4 392 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FAM71E2Q8N5Q1 922 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF611Q8N823 705 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 OR2M7Q8NG81 312 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 SIGLEC12Q96PQ1 595 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FAM173AQ9BQD7 235 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 SUCNR1Q9BXA5 334 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 SLC2A9Q9NRM0 540 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 SLC7A10Q9NS82 523 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 PURGQ9UJV8 347 aaKnown RBP6.22□□□□□ -1.41
CLCN3-202ENST00000360642 NOSIPQ9Y314 301 aaKnown RBP6.22□□□□□ -1.41
CLCN3-202ENST00000360642 PQLC2LA1A4F0 135 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 A4D1N5 150 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 LRP3O75074 770 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 SS18L1O75177 396 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-202ENST00000360642 MRPL33O75394 65 aaKnown RBP6.22□□□□□ -1.41
CLCN3-202ENST00000360642 JTBO76095 146 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 IGHV3-9P01782 118 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 RCC1P18754 421 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FUT3P21217 361 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 NPBWR2P48146 333 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 TMEM33P57088 247 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 LINC00310P59036 64 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 GUCA2BQ16661 112 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 SP6Q3SY56 376 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 TCEAL6Q6IPX3 200 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 EIF5AL1Q6IS14 154 aaKnown RBP6.22□□□□□ -1.41
CLCN3-202ENST00000360642 Q6ZS49 121 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FOXRED2Q8IWF2 684 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 LYPD6BQ8NI32 183 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 GLYATL2Q8WU03 294 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 TCEAL3Q969E4 200 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 TOMM40LQ969M1 308 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 SEC11CQ9BY50 192 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 FGF23Q9GZV9 251 aaPredicted RBP6.22□□□□□ -1.41
CLCN3-202ENST00000360642 ARV1Q9H2C2 271 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 ZNF286AQ9HBT8 521 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 STARD10Q9Y365 291 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 DOCK10Q96BY6 2186 aa6.22□□□□□ -1.41
CLCN3-202ENST00000360642 A0A1W2PNU3 283 aaPredicted RBP6.21□□□□□ -1.41
CLCN3-202ENST00000360642 FAM90A10PA6NDY2 464 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 C9orf118A6NHY6 69 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 LPAR6P43657 344 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 CAMPP49913 170 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 CAV2P51636 162 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 SRSF7Q16629 238 aaKnown RBP eCLIP6.21□□□□□ -1.41
CLCN3-202ENST00000360642 BTNL8Q6UX41 500 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 LYZL2Q7Z4W2 148 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 LDLRAD3Q86YD5 345 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 OR5T2Q8NGG2 359 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 TSNAXQ99598 290 aaKnown RBP6.21□□□□□ -1.41
CLCN3-202ENST00000360642 STRADBQ9C0K7 418 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 TLNRD1Q9H1K6 362 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 UQCC1Q9NVA1 299 aa6.21□□□□□ -1.41
CLCN3-202ENST00000360642 BOD1L1Q8NFC6 3051 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 ATP6V1G2-DDX39BF2Z307 99 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 COX5BP10606 129 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 PLA2G5P39877 138 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 SMCO1Q147U7 214 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 ADIPOQQ15848 244 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 ABCA11PQ4W5N1 156 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 SLC25A26Q70HW3 274 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 SAXO1Q8IYX7 474 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 UBAC2Q8NBM4 344 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 PRRG4Q9BZD6 226 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 RHOFQ9HBH0 211 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 PARP11Q9NR21 331 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 PARPBPQ9NWS1 579 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 FOXJ2Q9P0K8 574 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 KMT2EQ8IZD2 1858 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 A0A0U1RQK1 487 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 ZNF320A2RRD8 509 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 E5RGE8 158 aa6.21□□□□□ -1.42
CLCN3-202ENST00000360642 F8W036 122 aa6.21□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms