RNA–Protein interactions for RNA: ENST00000360579.11

VPS29-201, Transcript of VPS29, retromer complex component, humanhuman

TSL 1 (best) BASIC

Gene VPS29, Length 1,091 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-201ENST00000360579 FAM71E2Q8N5Q1 922 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 LINC00311Q8N616 119 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 ZNF491Q8N8L2 437 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 C8orf31Q8N9H6 132 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 OR2G2Q8NGZ5 317 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 CNIH3Q8TBE1 160 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 UTP4Q969X6 686 aaKnown RBP10.76□□□□□ -0.69
VPS29-201ENST00000360579 SPACA5Q96QH8 159 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 HSPB9Q9BQS6 159 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 GHITMQ9H3K2 345 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 EDA2RQ9HAV5 297 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 ENOPH1Q9UHY7 261 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 MYRFQ9Y2G1 1151 aa10.76□□□□□ -0.69
VPS29-201ENST00000360579 TRAV24A0A0B4J272 114 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 ZAR1LA6NP61 321 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 JTBO76095 146 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 VEGFCP49767 419 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 GABPB1Q06547 395 aaPredicted RBP10.75□□□□□ -0.69
VPS29-201ENST00000360579 TMED1Q13445 227 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 IL13RA2Q14627 380 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 TP53I3Q53FA7 332 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 ASPHD1Q5U4P2 390 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 KCTD20Q7Z5Y7 419 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 TMEM104Q8NE00 496 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 OR52M1Q8NGK5 317 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 OR13C3Q8NGS6 347 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 RTN4IP1Q8WWV3 396 aaPredicted RBP10.75□□□□□ -0.69
VPS29-201ENST00000360579 DCUN1D4Q92564 292 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 CPNE2Q96FN4 548 aaPredicted RBP10.75□□□□□ -0.69
VPS29-201ENST00000360579 NR1H4Q96RI1 486 aaPredicted RBP10.75□□□□□ -0.69
VPS29-201ENST00000360579 OR51J1Q9H342 316 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 ZCCHC4Q9H5U6 513 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 GNB4Q9HAV0 340 aa10.75□□□□□ -0.69
VPS29-201ENST00000360579 ZNF107Q9UII5 783 aaPredicted RBP10.75□□□□□ -0.69
VPS29-201ENST00000360579 FKBP6O75344 327 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 CALB2P22676 271 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 CCR9P51686 369 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 KISS1Q15726 138 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 Q3ZCU0 254 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 FDX2Q6P4F2 183 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 ADAMTSL5Q6ZMM2 481 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 PXT1Q8NFP0 134 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 RFKQ969G6 155 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 FRRS1LQ9P0K9 344 aa10.74□□□□□ -0.69
VPS29-201ENST00000360579 PLECQ15149 4684 aaKnown RBP10.74□□□□□ -0.69
VPS29-201ENST00000360579 TRIM64CA6NLI5 447 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 RPSAP08865 295 aaKnown RBP10.73□□□□□ -0.69
VPS29-201ENST00000360579 OR8U9P0C7N5 309 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 PPIFP30405 207 aaKnown RBP10.73□□□□□ -0.69
VPS29-201ENST00000360579 GNB1P62873 340 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 ZNF85Q03923 595 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 KIAA0141Q14154 515 aaPredicted RBP10.73□□□□□ -0.69
VPS29-201ENST00000360579 GALEQ14376 348 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 SPATA24Q86W54 205 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 LYPD6Q86Y78 171 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 OR5D14Q8NGL3 314 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 PLPPR1Q8TBJ4 325 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 ST6GALNAC6Q969X2 333 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 OR5B12Q96R08 314 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 KLK15Q9H2R5 256 aa10.73□□□□□ -0.69
VPS29-201ENST00000360579 LINC01619G3V211 115 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 SDCBPO00560 298 aaPredicted RBP10.72□□□□□ -0.69
VPS29-201ENST00000360579 SULT1B1O43704 296 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 IGLV1-40P01703 118 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 HTR1AP08908 422 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 EPHA2P29317 976 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 RAB9AP51151 201 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 F2RL1P55085 397 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 ZNF691Q5VV52 312 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 SERPINA12Q8IW75 414 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 OR51A4Q8NGJ6 313 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 ARL11Q969Q4 196 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 SPATA25Q9BR10 227 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 DPCDQ9BVM2 203 aaPredicted RBP10.72□□□□□ -0.69
VPS29-201ENST00000360579 GFOD1Q9NXC2 390 aa10.72□□□□□ -0.69
VPS29-201ENST00000360579 MRPS28Q9Y2Q9 187 aaKnown RBP10.72□□□□□ -0.69
VPS29-201ENST00000360579 TMEM30CPA0ZSE6 113 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 FAM90A10PA6NDY2 464 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 A8MZ25 164 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 ZNF736B4DX44 427 aaPredicted RBP10.71□□□□□ -0.69
VPS29-201ENST00000360579 SLC16A6O15403 523 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 MAGEB3O15480 346 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 ORC5O43913 435 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 MITFO75030 526 aaPredicted RBP10.71□□□□□ -0.69
VPS29-201ENST00000360579 IGHV4-30-4P0DP06 118 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 ZNF137PP52743 207 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 NANOS3P60323 173 aaKnown RBP10.71□□□□□ -0.69
VPS29-201ENST00000360579 FLOT2Q14254 428 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 MMDQ15546 238 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 SRSF7Q16629 238 aaKnown RBP eCLIP10.71□□□□□ -0.69
VPS29-201ENST00000360579 ACSM6Q6P461 480 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 SGPP2Q8IWX5 399 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 OR8J1Q8NGP2 316 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 OR10AC1Q8NH08 325 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 DLX4Q92988 240 aaPredicted RBP10.71□□□□□ -0.69
VPS29-201ENST00000360579 EME1Q96AY2 570 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 OR4C12Q96R67 309 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 THTPAQ9BU02 230 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 IFT22Q9H7X7 185 aa10.71□□□□□ -0.69
VPS29-201ENST00000360579 RAB9BQ9NP90 201 aa10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms