RNA–Protein interactions for RNA: ENST00000360413.7

SRGAP3-201, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best) BASIC

Gene SRGAP3, Length 8,415 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-201ENST00000360413 TDHQ8IZJ6 230 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 ZNF502Q8TBZ5 544 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 ASB16Q96NS5 453 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 GUCA2BQ16661 112 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 OTOSQ8NHW6 89 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 PDLIM7Q9NR12 457 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 ABCA7Q8IZY2 2146 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 SLC25A1P53007 311 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 V9GYH0 126 aa11.71□□□□□ -0.53
SRGAP3-201ENST00000360413 DNAJC25-GNG10A0A024R161 153 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 ZBTB42B2RXF5 422 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 MPDU1O75352 247 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 SSPNQ14714 243 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 LRP10Q7Z4F1 713 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 LILRA3Q8N6C8 439 aaPredicted RBP11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 ALG14Q96F25 216 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 SIRT5Q9NXA8 310 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 PRNDQ9UKY0 176 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 PLXNB2O15031 1838 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 A0A1W2PNR3 127 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 FCGR3BO75015 233 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 HOXC4P09017 264 aaPredicted RBP11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 MRPL58Q14197 206 aaKnown RBP11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 RTP5Q14D33 572 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 PSG5Q15238 335 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 PLPPR5Q32ZL2 321 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 EBLN2Q6P2I7 272 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 TMEM183AQ8IXX5 376 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 FLYWCH2Q96CP2 140 aaKnown RBP11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 AURKAIP1Q9NWT8 199 aaPredicted RBP11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 B9D1Q9UPM9 204 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 UCNP55089 124 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 KISS1Q15726 138 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 FAM206AQ9NX38 181 aa11.71□□□□□ -0.54
SRGAP3-201ENST00000360413 LDLRAD1Q5T700 205 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 PRELID3AQ96N28 172 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 CXXC4Q9H2H0 198 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 OR11G2Q8NGC1 345 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 ARAP2Q8WZ64 1704 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 S1PR2O95136 353 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 MDKP21741 143 aaPredicted RBP11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF506Q5JVG8 444 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 GVQW1Q8N7I0 195 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 OR13H1Q8NG92 308 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 RNASE1P07998 156 aaKnown RBP11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF137PP52743 207 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 SGMS2Q8NHU3 365 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 TM4SF19Q96DZ7 209 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 NCKAP5O14513 1909 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 IGHV3-15A0A0B4J1V0 119 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 TMEM202A6NGA9 273 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 RER1O15258 196 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 LYZP61626 148 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 CLEC18BQ6UXF7 455 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 ZBTB34Q8NCN2 500 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 PRR13Q9NZ81 148 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 NEU3Q9UQ49 428 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 MPC1Q9Y5U8 109 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 CDC14BO60729 498 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 FAM157CP0CG43 387 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 CDAP32320 146 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 SMDT1Q9H4I9 107 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 RAC3P60763 192 aa11.7□□□□□ -0.54
SRGAP3-201ENST00000360413 CTDSPLO15194 276 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 ZFPL1O95159 310 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF683Q8IZ20 524 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 VSIG4Q9Y279 399 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 PLXNA1Q9UIW2 1896 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 DHHO43323 396 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 ZNF345Q14585 488 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 SAMD13Q5VXD3 122 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 LAMTOR1Q6IAA8 161 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 CYB561D1Q8N8Q1 229 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 NUDT10Q8NFP7 164 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 OR4P4Q8NGL7 312 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 TNFRSF12AQ9NP84 129 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 GFYI3L273 518 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 PAGE4O60829 102 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 MMP9P14780 707 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 MUC1P15941 1255 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 SURF2Q15527 256 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 ABHD14AQ9BUJ0 271 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 ZBP1Q9H171 429 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 ELF5Q9UKW6 265 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 LRRK1Q38SD2 2015 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 TGIF2-C20orf24A0A0A6YYL0 155 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 IFNL4K9M1U5 179 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 CXorf1O96002 111 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 WDR38Q5JTN6 314 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 SLC25A34Q6PIV7 304 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 TMUB1Q9BVT8 246 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 GHITMQ9H3K2 345 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 OR2W1Q9Y3N9 320 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 A0A0B4J293 547 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 LINC01553A4QN01 128 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 KCNE3Q9Y6H6 103 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 IGLV3-10A0A075B6K4 115 aa11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 CYB5R3P00387 301 aaPredicted RBP11.69□□□□□ -0.54
SRGAP3-201ENST00000360413 OR3A4PP47883 348 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms