RNA–Protein interactions for RNA: ENST00000360001.10

SDF4-202, Transcript of stromal cell derived factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SDF4, Length 1,956 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-202ENST00000360001 ADAD2Q8NCV1 583 aaKnown RBP19.33■□□□□ 0.68
SDF4-202ENST00000360001 CCL13Q99616 98 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 CABLES2Q9BTV7 478 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 MED28Q9H204 178 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 PPIAL4AQ9Y536 164 aa19.33■□□□□ 0.68
SDF4-202ENST00000360001 CCNKO75909 580 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 C4orf46Q504U0 113 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 KIRREL1Q96J84 757 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 SCGB3A2Q96PL1 93 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 RTBDNQ9BSG5 229 aaPredicted RBP19.32■□□□□ 0.68
SDF4-202ENST00000360001 FXYD6Q9H0Q3 95 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 ZNF665Q9H7R5 613 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 DCHS2Q6V1P9 2916 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 FAM208BQ5VWN6 2430 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 CREBL2O60519 120 aaPredicted RBP19.32■□□□□ 0.68
SDF4-202ENST00000360001 AADACP22760 399 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 ECI1P42126 302 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 EDDM3AQ14507 147 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 UBTD1Q9HAC8 227 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 TAF9BQ9HBM6 251 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 PCDHB10Q9UN67 800 aa19.32■□□□□ 0.68
SDF4-202ENST00000360001 TRBV6-7A0A0A0MS04 114 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 PI3P19957 117 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 FCN2Q15485 313 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 HFEQ30201 348 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 CD276Q5ZPR3 534 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 FAM216BQ8N7L0 139 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 MOB3AQ96BX8 217 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 RAB1BQ9H0U4 201 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 ZNF69Q9UC07 566 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 LAMP3Q9UQV4 416 aa19.31■□□□□ 0.68
SDF4-202ENST00000360001 A8MV72 311 aaPredicted RBP19.3■□□□□ 0.68
SDF4-202ENST00000360001 LYNX1G3V0Z9 82 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 SIGLEC5O15389 551 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 SSNA1O43805 119 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 LYNX1P0DP58 116 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 COL8A2P25067 703 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 MUC20Q8N307 709 aaPredicted RBP19.3■□□□□ 0.68
SDF4-202ENST00000360001 TMEM185AQ8NFB2 350 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 TMEM230Q96A57 120 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 ST6GAL2Q96JF0 529 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 SLC23A1Q9UHI7 598 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 C12orf77C9JDV5 145 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 TUSC2O75896 110 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 GOSR1O95249 250 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 PPYP01298 95 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 PGAM2P15259 253 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 FXYD4P59646 89 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 DHRS2Q13268 280 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 FAHD2BQ6P2I3 314 aaPredicted RBP19.3■□□□□ 0.68
SDF4-202ENST00000360001 PRR18Q8N4B5 295 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 OR5D13Q8NGL4 314 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 OR13A1Q8NGR1 328 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 UBALD1Q8TB05 177 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 MRGPRDQ8TDS7 321 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 ZNF431Q8TF32 576 aaPredicted RBP19.3■□□□□ 0.68
SDF4-202ENST00000360001 FAHD2AQ96GK7 314 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 SPOCK3Q9BQ16 436 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 KCNIP1Q9NZI2 227 aa19.3■□□□□ 0.68
SDF4-202ENST00000360001 ODAMA1E959 279 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 BOLA2-SMG1P6H3BVE0 249 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 TNFRSF13BO14836 293 aaPredicted RBP19.29■□□□□ 0.68
SDF4-202ENST00000360001 AKR1C4P17516 323 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 ZBTB25P24278 435 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 P2RX3P56373 397 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 IL13RA1P78552 427 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 PPP1R1AQ13522 171 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 OR11H7Q8NGC8 314 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 IL1F10Q8WWZ1 152 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 TOMM40LQ969M1 308 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 DCTN5Q9BTE1 182 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 FAM234AQ9H0X4 552 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 DNTTIP1Q9H147 329 aa19.29■□□□□ 0.68
SDF4-202ENST00000360001 NPIPB11E5RHQ5 1161 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 HNRNPCP07910 306 aaKnown RBP eCLIP19.28■□□□□ 0.68
SDF4-202ENST00000360001 ZNF728P0DKX0 622 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 TAS2R31P59538 309 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 OR10J5Q8NHC4 309 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 OR1A1Q9P1Q5 309 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 NKX6-3A6NJ46 265 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 TMPRSS2O15393 492 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 RP2O75695 350 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 CTSDP07339 412 aaPredicted RBP19.28■□□□□ 0.68
SDF4-202ENST00000360001 SULT1A3P0DMM9 295 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 SULT1A4P0DMN0 295 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 UCP3P55916 312 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 HERV-K104P61576 105 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 DHODHQ02127 395 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 C6orf183Q5T699 404 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 OR1L1Q8NH94 360 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 LURAP1Q96LR2 239 aa19.28■□□□□ 0.68
SDF4-202ENST00000360001 DIRAS3O95661 229 aa19.27■□□□□ 0.68
SDF4-202ENST00000360001 HLA-AP01891 365 aaKnown RBP19.27■□□□□ 0.68
SDF4-202ENST00000360001 UBE2MP61081 183 aaKnown RBP19.27■□□□□ 0.68
SDF4-202ENST00000360001 CD83Q01151 205 aa19.27■□□□□ 0.68
SDF4-202ENST00000360001 TMEM128Q5BJH2 165 aa19.27■□□□□ 0.68
SDF4-202ENST00000360001 LYG2Q86SG7 212 aa19.27■□□□□ 0.68
SDF4-202ENST00000360001 H1FOOQ8IZA3 346 aaPredicted RBP19.27■□□□□ 0.68
SDF4-202ENST00000360001 ZFAND1Q8TCF1 268 aa19.27■□□□□ 0.68
SDF4-202ENST00000360001 NCOR1P1Q9H4R4 102 aa19.27■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms