RNA–Protein interactions for RNA: ENST00000354558.7

CKAP5-202, Transcript of cytoskeleton associated protein 5, humanhuman

TSL 1 (best) BASIC

Gene CKAP5, Length 6,428 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP5-202ENST00000354558 ZNF561Q8N587 486 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 TMEM252Q8N6L7 170 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 ZBTB44Q8NCP5 570 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 OR52I1Q8NGK6 324 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 SYNGR1O43759 233 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 ZNF735P0CB33 412 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 MAS1LP35410 378 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 RPS10P46783 165 aaKnown RBP4.46□□□□□ -1.69
CKAP5-202ENST00000354558 GNG4P50150 75 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 CSRP3P50461 194 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 NHLH2Q02577 135 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 HAGHQ16775 308 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 C1QTNF12Q5T7M4 302 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 GCSAMQ8N6F7 178 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 CLRN3Q8NCR9 226 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 OR5AP2Q8NGF4 316 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 DLX4Q92988 240 aaPredicted RBP4.46□□□□□ -1.69
CKAP5-202ENST00000354558 MAP6Q96JE9 813 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 FAAP24Q9BTP7 215 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 PDFQ9HBH1 243 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 TAF9BQ9HBM6 251 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 MMP26Q9NRE1 261 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 NDUFB11Q9NX14 153 aa4.46□□□□□ -1.69
CKAP5-202ENST00000354558 SOX21Q9Y651 276 aaPredicted RBP4.46□□□□□ -1.69
CKAP5-202ENST00000354558 TRAV9-2A0A087WT02 112 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 TRAV20A0A0B4J274 112 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 TMEM200CA6NKL6 621 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 CCSO14618 274 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 H2AFB1P0C5Y9 115 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 PTBP1P26599 531 aaKnown RBP eCLIP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 MAGEB1P43366 347 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 CLDN18P56856 261 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 CLDN20P56880 219 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 PSG6Q00889 435 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 MLLT11Q13015 90 aaPredicted RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 BVESQ8NE79 360 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 OR10Z1Q8NGY1 313 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 MYOZ3Q8TDC0 251 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 WDR89Q96FK6 387 aaPredicted RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 NIPSNAP1Q9BPW8 284 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 MRPS16Q9Y3D3 137 aaKnown RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 TCHHQ07283 1943 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 EPPINO95925 133 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 FCGR3AP08637 254 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 FCGR2BP31994 310 aaPredicted RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 HRH1P35367 487 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 SULT1A1P50225 295 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 SUMO2P61956 95 aaKnown RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 RNF212Q495C1 297 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 SCGB1D4Q6XE38 83 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 NANOGP1Q8N7R0 232 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 SEC22CQ9BRL7 303 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 TNFRSF18Q9Y5U5 241 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 AP4M1O00189 453 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 FCMRO60667 390 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 OR2C1O95371 312 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 RECKO95980 971 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 MYOD1P15172 320 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 LMO1P25800 156 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 RPL35P42766 123 aaKnown RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 KISS1Q15726 138 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 C2orf68Q2NKX9 166 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 GDPD1Q8N9F7 314 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 OR51J1Q9H342 316 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 TUBB1Q9H4B7 451 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 UQCC1Q9NVA1 299 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 ZNF629Q9UEG4 869 aaPredicted RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 CD300AQ9UGN4 299 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 ZNF230Q9UIE0 474 aaPredicted RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 MYO9BQ13459 2157 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 KCNE1BA0A087WTH5 132 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 IGHV3-49A0A0A0MS15 119 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 OR4C46A6NHA9 309 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 HIST1H1BP16401 226 aaKnown RBP4.46□□□□□ -1.7
CKAP5-202ENST00000354558 GDNFP39905 211 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 CX3CL1P78423 397 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 SPRED3Q2MJR0 410 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 YIPF6Q96EC8 236 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 TEAD3Q99594 435 aa4.46□□□□□ -1.7
CKAP5-202ENST00000354558 FAM24AA6NFZ4 105 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 REG1AP05451 166 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 PI3P19957 117 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 RIPPLY3P57055 190 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 BTG1P62324 171 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 CLEC19AQ6UXS0 136 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 LCNL1Q6ZST4 164 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 DRAXINQ8NBI3 349 aaPredicted RBP4.45□□□□□ -1.7
CKAP5-202ENST00000354558 TMEM167AQ8TBQ9 72 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 PAXXQ9BUH6 204 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 TEX50A0A1B0GTY4 177 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 LIPT2A6NK58 231 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 TRDCB7Z8K6 153 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 G3V3Q6 166 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 J3QT63 122 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 FAM189A1O60320 539 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 PSPNO60542 156 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 MT-ND4LP03901 98 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 SLC38A11Q08AI6 406 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 KHDC3LQ587J8 217 aa4.45□□□□□ -1.7
CKAP5-202ENST00000354558 DHRS11Q6UWP2 260 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms